RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 FAM27BQ5VT28 67 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 HOGA1Q86XE5 327 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 CARFQ8N187 725 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 GDF15Q99988 308 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 HIF1ANQ9NWT6 349 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 NDRG3Q9UGV2 375 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 ST8SIA5O15466 376 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 SPP1P10451 314 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 EWSR1Q01844 656 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLIP4-201ENST00000320081 A0A0G2JMM0 328 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 A0A1W2PPB8 328 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 A0A1W2PRS3 328 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 NKX6-3A6NJ46 265 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 KIR3DP1A8MWS1 328 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 VDAC1P21796 283 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF426Q9BUY5 554 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 GPR132Q9UNW8 380 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 SYNGR2O43760 224 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 DHODHQ02127 395 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 RBPJQ06330 500 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 RNPS1Q15287 305 aaKnown RBP14.31□□□□□ -0.12
CLIP4-201ENST00000320081 ABHD14BQ96IU4 210 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 OR1A1Q9P1Q5 309 aa14.31□□□□□ -0.12
CLIP4-201ENST00000320081 ETV3LQ6ZN32 361 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 EDARADDQ8WWZ3 215 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 IP6K3Q96PC2 410 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 AP1S3Q96PC3 154 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 TTTY12Q9BZ98 90 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 OR51I2Q9H344 312 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 NGBQ9NPG2 151 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 RPS2P15880 293 aaKnown RBP14.3□□□□□ -0.12
CLIP4-201ENST00000320081 LGALS4P56470 323 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF273Q14593 569 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 M1APQ8TC57 530 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 NMES1Q9C002 83 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 EGLN1Q9GZT9 426 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 UCK1Q9HA47 277 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF98A6NK75 572 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 MKRN2OSH3BPM6 223 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 TMPRSS2O15393 492 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 PMELP40967 661 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 REG1BP48304 166 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 RAB13P51153 203 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 FAM181AQ8N9Y4 354 aa14.3□□□□□ -0.12
CLIP4-201ENST00000320081 PMS2P1A4D2B8 440 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 FAM157AC9JC47 383 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 CFHR1Q03591 330 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 FOXO1Q12778 655 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 GAMTQ14353 236 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 SLC25A47Q6Q0C1 308 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 C15orf54Q8N8G6 183 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 RND1Q92730 232 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 CLN8Q9UBY8 286 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 CST2P09228 141 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 CD200P41217 278 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 GFRALQ6UXV0 394 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 MOGAT3Q86VF5 341 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 OR52M1Q8NGK5 317 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 ZPBPQ9BS86 351 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 NPDC1Q9NQX5 325 aaPredicted RBP14.29□□□□□ -0.12
CLIP4-201ENST00000320081 IGHV1-45A0A0A0MS14 117 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 RPL11P62913 178 aaKnown RBP14.29□□□□□ -0.12
CLIP4-201ENST00000320081 H3F3AP84243 136 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 ATRAIDQ6UW56 229 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 CMTM2Q8TAZ6 248 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 SLC35E1Q96K37 410 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 ABHD14AQ9BUJ0 271 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF319Q9P2F9 582 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 LINC00271P0C7V0 271 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 COX7A1P24310 79 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 TCL1AP56279 114 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 IGLV3-21P80748 117 aaPredicted RBP14.29□□□□□ -0.12
CLIP4-201ENST00000320081 ENDOGQ14249 297 aaKnown RBP14.29□□□□□ -0.12
CLIP4-201ENST00000320081 C1orf100Q5SVJ3 147 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 RTN4RL2Q86UN3 420 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 PHYHIPLQ96FC7 376 aa14.29□□□□□ -0.12
CLIP4-201ENST00000320081 RYDENQ9NUL5 291 aaKnown RBP14.29□□□□□ -0.12
CLIP4-201ENST00000320081 RBFOX3A6NFN3 312 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 ACOT6Q3I5F7 207 aaPredicted RBP14.28□□□□□ -0.12
CLIP4-201ENST00000320081 FAHD2BQ6P2I3 314 aaPredicted RBP14.28□□□□□ -0.12
CLIP4-201ENST00000320081 FAHD2AQ96GK7 314 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 GAR1Q9NY12 217 aaKnown RBP14.28□□□□□ -0.12
CLIP4-201ENST00000320081 ZSWIM8A7E2V4 1837 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF891A8MT65 544 aaPredicted RBP14.28□□□□□ -0.12
CLIP4-201ENST00000320081 TRDCB7Z8K6 153 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 CCL8P80075 99 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 NSUN5P2Q63ZY6 315 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 SH3BGRL3Q9H299 93 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.28□□□□□ -0.12
CLIP4-201ENST00000320081 CLCF1Q9UBD9 225 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF835Q9Y2P0 537 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 TRGV10A0A0A0MS01 117 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 IGHV3-21A0A0B4J1V1 117 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 G3V3Q6 166 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 LYPD3O95274 346 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 HPP00738 406 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 MBPP02686 304 aaPredicted RBP14.28□□□□□ -0.12
CLIP4-201ENST00000320081 RBM11P57052 281 aaKnown RBP14.28□□□□□ -0.12
CLIP4-201ENST00000320081 RNF144BQ7Z419 303 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 SF3B5Q9BWJ5 86 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms