RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 C15orf40Q8WUR7 153 aa12.72□□□□□ -0.37
PDLIM5-202ENST00000318007 POM121Q96HA1 1249 aa12.72□□□□□ -0.37
PDLIM5-202ENST00000318007 TMPRSS13Q9BYE2 586 aa12.72□□□□□ -0.37
PDLIM5-202ENST00000318007 Q9N2K0 584 aa12.72□□□□□ -0.37
PDLIM5-202ENST00000318007 MMP26Q9NRE1 261 aa12.72□□□□□ -0.37
PDLIM5-202ENST00000318007 MCUBQ9NWR8 336 aa12.72□□□□□ -0.37
PDLIM5-202ENST00000318007 ONECUT1Q9UBC0 465 aa12.72□□□□□ -0.37
PDLIM5-202ENST00000318007 MTFP1Q9UDX5 166 aa12.72□□□□□ -0.37
PDLIM5-202ENST00000318007 TRGV10A0A0A0MS01 117 aa12.71□□□□□ -0.37
PDLIM5-202ENST00000318007 C12orf77C9JDV5 145 aa12.71□□□□□ -0.37
PDLIM5-202ENST00000318007 ZNF782Q6ZMW2 699 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-202ENST00000318007 ZNF565Q8N9K5 539 aa12.71□□□□□ -0.37
PDLIM5-202ENST00000318007 LEAP2Q969E1 77 aa12.71□□□□□ -0.37
PDLIM5-202ENST00000318007 ARL11Q969Q4 196 aa12.71□□□□□ -0.37
PDLIM5-202ENST00000318007 CREB3L1Q96BA8 519 aa12.71□□□□□ -0.37
PDLIM5-202ENST00000318007 REG4Q9BYZ8 158 aa12.71□□□□□ -0.37
PDLIM5-202ENST00000318007 SCPEP1Q9HB40 452 aa12.71□□□□□ -0.37
PDLIM5-202ENST00000318007 F5H0A9 414 aaPredicted RBP12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 UPK1BO75841 260 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 MMP23AO75900 390 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 FSTL3O95633 263 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 GLAP06280 429 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 SLC25A16P16260 332 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 KCNJ3P48549 501 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 ACTBP60709 375 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 ACTG1P63261 375 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 MRPS10P82664 201 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 CHRFAM7AQ494W8 412 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 UTF1Q5T230 341 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 SHEQ5VZ18 495 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 LYSMD2Q8IV50 215 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 PDZD9Q8IXQ8 264 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 OR10V1Q8NGI7 309 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 RAB39BQ96DA2 213 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 OCSTAMPQ9BR26 566 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 TINAGL1Q9GZM7 467 aaPredicted RBP12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 ZNF286AQ9HBT8 521 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 SLC23A1Q9UHI7 598 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 ANXA10Q9UJ72 324 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 RPUSD1Q9UJJ7 312 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 LOC105371242A0A075B767 164 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 PPIAL4CA0A0B4J2A2 164 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 ZNF736B4DX44 427 aaPredicted RBP12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 GSTZ1O43708 216 aaPredicted RBP12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 PPIAL4GP0DN37 164 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 NFYBP25208 207 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 PTBP1P26599 531 aaKnown RBP eCLIP12.7□□□□□ -0.389e-7■■■■■ 28.1
PDLIM5-202ENST00000318007 ARF6P62330 175 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 HERPUD1Q15011 391 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 PRAMEF5Q5TYX0 476 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 HOGA1Q86XE5 327 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 OR56B4Q8NH76 319 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 CCDC32Q9BV29 185 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 OR1A1Q9P1Q5 309 aa12.7□□□□□ -0.38
PDLIM5-202ENST00000318007 DSCAML1Q8TD84 2053 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 WNK2Q9Y3S1 2297 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 hADV38S2A0JD32 116 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 KIAA1324LA8MWY0 1029 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 SULT1C2O00338 296 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 FABP7O15540 132 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 HBZP02008 142 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 DTYMKP23919 212 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 HLA-DRB3P79483 266 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 GNMTQ14749 295 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 SEBOXQ9HB31 216 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 CALYQ9NYX4 217 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 EHFQ9NZC4 300 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 KCNIP1Q9NZI2 227 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 OR6C3Q9NZP0 311 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 RBMX2Q9Y388 322 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 IGKV1-6A0A0C4DH72 117 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 FUOMA2VDF0 154 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 H7C1Q1 480 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 CA11O75493 328 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 HEXAP06865 529 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 NFYAP23511 347 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 RCVRNP35243 200 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 SCGB2B2Q4G0G5 96 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 GAPTQ8N292 157 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 OR52L2PQ8NGH6 319 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 BORCS5Q969J3 196 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 ZNF714Q96N38 554 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 RIMS4Q9H426 269 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 SIRT7Q9NRC8 400 aa12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 MBNL3Q9NUK0 354 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-202ENST00000318007 A0A096LNT2 108 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 TRDCB7Z8K6 153 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 HSPA12AO43301 675 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 ERP29P30040 261 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 CBX5P45973 191 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 OR3A3P47888 321 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 NPY4RP50391 375 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 C17orf58Q2M2W7 97 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 STEAP1BQ6NZ63 245 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 GLCCI1Q86VQ1 547 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 OR4C16Q8NGL9 310 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 OR5H2Q8NGV7 314 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 FOXC2Q99958 501 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 RABL2AQ9UBK7 228 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 RABL2BQ9UNT1 228 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms