RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 UMODP07911 640 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 MMP7P09237 267 aaPredicted RBP11.87□□□□□ -0.51
MKS1-201ENST00000313863 BCL2P10415 239 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 F2RP25116 425 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 RND2P52198 227 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 ZNF343Q6P1L6 599 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 COLCA1Q6ZS62 124 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 GGNQ86UU5 652 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 ODF3L1Q8IXM7 274 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 ZDHHC23Q8IYP9 409 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 AGBL5Q8NDL9 886 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 FAM210BQ96KR6 192 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 CCL28Q9NRJ3 127 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 GNG13Q9P2W3 67 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 HS3ST3B1Q9Y662 390 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 URGCP-MRPS24S4R325 110 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 USP34Q70CQ2 3546 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 TRBV23-1A0A0A0MS06 115 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 LY6G6EA0A0G2JKS1 128 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 IFITM10A6NMD0 228 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 IGHEP01854 428 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 OPN1MWP04001 364 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 OPN1MW2P0DN77 364 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 OPN1MW3P0DN78 364 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 HBG1P69891 147 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 HBG2P69892 147 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 PRDX4Q13162 271 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 DAZAP2Q15038 168 aaPredicted RBP11.87□□□□□ -0.51
MKS1-201ENST00000313863 CEACAM21Q3KPI0 293 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 ZNF787Q6DD87 383 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 ZNF383Q8NA42 475 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 OR10D4PQ8NGN7 298 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 RNASE11Q8TAA1 199 aaKnown RBP11.87□□□□□ -0.51
MKS1-201ENST00000313863 MBD3L1Q8WWY6 194 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 TMEM45BQ96B21 275 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 AKIRIN1Q9H9L7 192 aaPredicted RBP11.87□□□□□ -0.51
MKS1-201ENST00000313863 CALHM2Q9HA72 323 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 TAAR3PQ9P1P4 343 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 U3KQA8 63 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 TNRC6AQ8NDV7 1962 aaKnown RBP11.86□□□□□ -0.51
MKS1-201ENST00000313863 PI4KAP42356 2102 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 IGKV1D-13A0A0B4J2D9 117 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 IGKV1-13P0DP09 117 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 EPHA1P21709 976 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 GPX4P36969 197 aaPredicted RBP11.86□□□□□ -0.51
MKS1-201ENST00000313863 PAX9P55771 341 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 RAB11AP62491 216 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 SERF2P84101 59 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 OR2T2Q6IF00 324 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 TCEAL6Q6IPX3 200 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 P4HA3Q7Z4N8 544 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 YRDCQ86U90 279 aaKnown RBP11.86□□□□□ -0.51
MKS1-201ENST00000313863 HIST3H2BBQ8N257 126 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 OR56B2PQ8NGI1 322 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 OR2Y1Q8NGV0 311 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 LSM10Q969L4 123 aaKnown RBP11.86□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H2AAQ96QV6 131 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 REPIN1Q9BWE0 567 aaKnown RBP11.86□□□□□ -0.51
MKS1-201ENST00000313863 MRPS18CQ9Y3D5 142 aaKnown RBP11.86□□□□□ -0.51
MKS1-201ENST00000313863 OR2W1Q9Y3N9 320 aa11.86□□□□□ -0.51
MKS1-201ENST00000313863 ST8SIA5O15466 376 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 CYTIPO60759 359 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 TRGC2P03986 189 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 COX5BP10606 129 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H1BP16401 226 aaKnown RBP11.85□□□□□ -0.51
MKS1-201ENST00000313863 NTF4P34130 210 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 HERPUD1Q15011 391 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 Q3ZCU0 254 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 MRPL21Q7Z2W9 205 aaKnown RBP11.85□□□□□ -0.51
MKS1-201ENST00000313863 OR10D3Q8NH80 312 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 OR10J5Q8NHC4 309 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 PINX1Q96BK5 328 aaKnown RBP11.85□□□□□ -0.51
MKS1-201ENST00000313863 PARD6GQ9BYG4 376 aaPredicted RBP11.85□□□□□ -0.51
MKS1-201ENST00000313863 ZNF576Q9H609 170 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 SDK1Q7Z5N4 2213 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 TRBV24-1A0A075B6N3 115 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 OR5H1A6NKK0 313 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 FOLR3P41439 243 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 FAM90A2PQ658T7 463 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 SPNS3Q6ZMD2 512 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 MRGPRGQ86SM5 289 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 FGFBP3Q8TAT2 258 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 CLDN23Q96B33 292 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 ADGRG7Q96K78 797 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 LRFN1Q9P244 771 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 VAX2Q9UIW0 290 aa11.85□□□□□ -0.51
MKS1-201ENST00000313863 CNTRLQ7Z7A1 2325 aa11.84□□□□□ -0.51
MKS1-201ENST00000313863 DEGS1O15121 323 aa11.84□□□□□ -0.51
MKS1-201ENST00000313863 IFNA10P01566 189 aa11.84□□□□□ -0.51
MKS1-201ENST00000313863 GPM6AP51674 278 aa11.84□□□□□ -0.51
MKS1-201ENST00000313863 TRA2AQ13595 282 aaKnown RBP eCLIP11.84□□□□□ -0.51
MKS1-201ENST00000313863 PMS2P11Q13670 270 aa11.84□□□□□ -0.51
MKS1-201ENST00000313863 LILRB2Q8N423 598 aa11.84□□□□□ -0.51
MKS1-201ENST00000313863 OR5A2Q8NGI9 324 aa11.84□□□□□ -0.51
MKS1-201ENST00000313863 SAP25Q8TEE9 199 aa11.84□□□□□ -0.51
MKS1-201ENST00000313863 PSMF1Q92530 271 aa11.84□□□□□ -0.51
MKS1-201ENST00000313863 APOBEC3DQ96AK3 386 aaPredicted RBP11.84□□□□□ -0.51
MKS1-201ENST00000313863 GPR146Q96CH1 333 aa11.84□□□□□ -0.51
MKS1-201ENST00000313863 RCC1LQ96I51 464 aaKnown RBP11.84□□□□□ -0.51
MKS1-201ENST00000313863 LINC00470Q9BZP3 86 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms