RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 RPEQ96AT9 228 aa6.48□□□□□ -1.37
TPM3-203ENST00000312970 CPNE2Q96FN4 548 aaPredicted RBP6.48□□□□□ -1.37
TPM3-203ENST00000312970 KIRREL1Q96J84 757 aa6.48□□□□□ -1.37
TPM3-203ENST00000312970 GPER1Q99527 375 aa6.48□□□□□ -1.37
TPM3-203ENST00000312970 PDCD1LG2Q9BQ51 273 aa6.48□□□□□ -1.37
TPM3-203ENST00000312970 PPIL3Q9H2H8 161 aaKnown RBP6.48□□□□□ -1.37
TPM3-203ENST00000312970 LINC00574Q9H8X3 128 aa6.48□□□□□ -1.37
TPM3-203ENST00000312970 AMBNQ9NP70 447 aa6.48□□□□□ -1.37
TPM3-203ENST00000312970 INPP5EQ9NRR6 644 aa6.48□□□□□ -1.37
TPM3-203ENST00000312970 DHDHQ9UQ10 334 aa6.48□□□□□ -1.37
TPM3-203ENST00000312970 AMMECR1Q9Y4X0 333 aaPredicted RBP6.48□□□□□ -1.37
TPM3-203ENST00000312970 DYNC2H1Q8NCM8 4307 aaKnown RBP6.48□□□□□ -1.37
TPM3-203ENST00000312970 RYR2Q92736 4967 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 TRAV24A0A0B4J272 114 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 SH2D7A6NKC9 451 aaPredicted RBP6.47□□□□□ -1.37
TPM3-203ENST00000312970 E9PI62 339 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 H3BNX3 289 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 HSPB6O14558 160 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 DUS4LO95620 317 aaKnown RBP6.47□□□□□ -1.37
TPM3-203ENST00000312970 CLIC3O95833 236 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 KCNJ3P48549 501 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 SLC35A2P78381 396 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 MADCAM1Q13477 382 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 IL13RA2Q14627 380 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 RSU1Q15404 277 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 PAN3Q58A45 887 aaKnown RBP6.47□□□□□ -1.37
TPM3-203ENST00000312970 UTF1Q5T230 341 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 C10orf99Q6UWK7 81 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 ASCL4Q6XD76 172 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 OSR2Q8N2R0 312 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 ARL6IP6Q8N6S5 226 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 Q8NFD4 153 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 OR10A7Q8NGE5 316 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 OR13A1Q8NGR1 328 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 TSEN15Q8WW01 171 aaKnown RBP6.47□□□□□ -1.37
TPM3-203ENST00000312970 TOMM40LQ969M1 308 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 ZNF649Q9BS31 505 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 C9orf16Q9BUW7 83 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 HEYLQ9NQ87 328 aaPredicted RBP6.47□□□□□ -1.37
TPM3-203ENST00000312970 MRPS18AQ9NVS2 196 aaKnown RBP6.47□□□□□ -1.37
TPM3-203ENST00000312970 CALYQ9NYX4 217 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 IDI2-AS1Q9NZ38 188 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 KIF25Q9UIL4 384 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 PSG11Q9UQ72 335 aa6.47□□□□□ -1.37
TPM3-203ENST00000312970 RPL36Q9Y3U8 105 aaKnown RBP6.47□□□□□ -1.37
TPM3-203ENST00000312970 SACSQ9NZJ4 4579 aa6.46□□□□□ -1.37
TPM3-203ENST00000312970 LOC100130705A0A1B0GUX0 176 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 PSMB11A5LHX3 300 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 NPIPB11E5RHQ5 1161 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 GABRPO00591 440 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 MPIG6BO95866 241 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 IGHV3-7P01780 117 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 CD2P06729 351 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 SNRNP70P08621 437 aaKnown RBP6.46□□□□□ -1.38
TPM3-203ENST00000312970 GZMHP20718 246 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 GLP1RP43220 463 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 SOX2P48431 317 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 RAB7AP51149 207 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 GTF2A1P52655 376 aaPredicted RBP6.46□□□□□ -1.38
TPM3-203ENST00000312970 PAX5Q02548 391 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 HES1Q14469 280 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 ZSCAN26Q16670 478 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 CCDC58Q4VC31 144 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 DEFB121Q5J5C9 76 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 RSBN1Q5VWQ0 802 aaPredicted RBP6.46□□□□□ -1.38
TPM3-203ENST00000312970 LPCAT4Q643R3 524 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 ZNF529Q6P280 563 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 RPL22L1Q6P5R6 122 aaKnown RBP6.46□□□□□ -1.38
TPM3-203ENST00000312970 OR8H3Q8N146 312 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 DRAM1Q8N682 238 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 OR8H1Q8NGG4 311 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 OR52I1Q8NGK6 324 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 RFESDQ8TAC1 157 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 GPR148Q8TDV2 347 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 CHPT1Q8WUD6 406 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 TNFAIP8L1Q8WVP5 186 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 LEAP2Q969E1 77 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 SLC29A1Q99808 456 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.46□□□□□ -1.38
TPM3-203ENST00000312970 FAM118AQ9NWS6 357 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 ING4Q9UNL4 249 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 MOB4Q9Y3A3 225 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 HSPE1-MOB4S4R3N1 261 aa6.46□□□□□ -1.38
TPM3-203ENST00000312970 K7EIL1 84 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 FGF16O43320 207 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 CDRT1O95170 752 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 IL1AP01583 271 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 LIMS3P0CW19 117 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 LIMS4P0CW20 117 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 TMEM11P17152 192 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 DIAPH2-AS1Q14236 149 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 HNF4GQ14541 408 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 LTC4SQ16873 150 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 PIGYQ3MUY2 71 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 TMPRSS11AQ6ZMR5 421 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 ZNF329Q86UD4 541 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 SUMF2Q8NBJ7 301 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 OR51D1Q8NGF3 324 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 OR51A2Q8NGJ7 313 aa6.45□□□□□ -1.38
TPM3-203ENST00000312970 OR10K1Q8NGX5 313 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms