RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 ZNF808Q8N4W9 903 aaPredicted RBP11.7□□□□□ -0.54
NPAS4-201ENST00000311034 SPIN2AQ99865 258 aa11.7□□□□□ -0.54
NPAS4-201ENST00000311034 SPIN2BQ9BPZ2 258 aa11.7□□□□□ -0.54
NPAS4-201ENST00000311034 PRDM6Q9NQX0 595 aa11.7□□□□□ -0.54
NPAS4-201ENST00000311034 CCL28Q9NRJ3 127 aa11.7□□□□□ -0.54
NPAS4-201ENST00000311034 NOTCH3Q9UM47 2321 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 A0A0G2JMM0 328 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 A0A0J9YW62 118 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 A0A0U1RQV5 110 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 A0A1W2PPB8 328 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 A0A1W2PRS3 328 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 KIR3DP1A8MWS1 328 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 TRDCB7Z8K6 153 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 TK1P04183 234 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 SCTP09683 121 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 MAML2Q8IZL2 1156 aaPredicted RBP11.69□□□□□ -0.54
NPAS4-201ENST00000311034 SCGB1C1Q8TD33 95 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 MOB3AQ96BX8 217 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 FZR1Q9UM11 496 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 MED13Q9UHV7 2174 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 OR4D5Q8NGN0 318 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 CA5BP1Q8WTZ4 195 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 HES7Q9BYE0 225 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 PLK3Q9H4B4 646 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 FOXD3Q9UJU5 478 aaPredicted RBP11.69□□□□□ -0.54
NPAS4-201ENST00000311034 SPG11Q96JI7 2443 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 CEP295Q9C0D2 2601 aa11.69□□□□□ -0.54
NPAS4-201ENST00000311034 DDTP30046 118 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 LSM6P62312 80 aaKnown RBP11.68□□□□□ -0.54
NPAS4-201ENST00000311034 ZNF787Q6DD87 383 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 ZNF818PQ6ZRF7 136 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 ZNF100Q8IYN0 542 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 HIST3H2BBQ8N257 126 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 NFAM1Q8NET5 270 aaPredicted RBP11.68□□□□□ -0.54
NPAS4-201ENST00000311034 EXTL1Q92935 676 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 MRPS17Q9Y2R5 130 aaKnown RBP11.68□□□□□ -0.54
NPAS4-201ENST00000311034 EML6Q6ZMW3 1958 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 ZNF816-ZNF321PA0A0X1KG74 233 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 PDCD6O75340 191 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 PITX3O75364 302 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 TUSC2O75896 110 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 TMEM50AO95807 157 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 TFF1P04155 84 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 RFPL3SP0C7P2 107 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 NR2C1P13056 603 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 PTGDSP41222 190 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 SSX2Q16385 188 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 RPUSD4Q96CM3 377 aaKnown RBP11.68□□□□□ -0.54
NPAS4-201ENST00000311034 WFIKKN1Q96NZ8 548 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 PRDM13Q9H4Q3 707 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 C19orf25Q9UFG5 118 aaPredicted RBP11.68□□□□□ -0.54
NPAS4-201ENST00000311034 INTS1Q8N201 2190 aaKnown RBP11.68□□□□□ -0.54
NPAS4-201ENST00000311034 GRPP07492 148 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 METTL15P1P0C7V9 234 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 DTYMKP23919 212 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 TGFBR3Q03167 851 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 ZNF385CQ66K41 422 aaPredicted RBP11.68□□□□□ -0.54
NPAS4-201ENST00000311034 C1QL4Q86Z23 238 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 CALHM1Q8IU99 346 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 DMRTC2Q8IXT2 367 aaPredicted RBP11.68□□□□□ -0.54
NPAS4-201ENST00000311034 KDF1Q8NAX2 398 aaPredicted RBP11.68□□□□□ -0.54
NPAS4-201ENST00000311034 MAFAQ8NHW3 353 aaPredicted RBP11.68□□□□□ -0.54
NPAS4-201ENST00000311034 SPSB1Q96BD6 273 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 HINT2Q9BX68 163 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 TMEM222Q9H0R3 208 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 VSIRQ9H7M9 311 aa11.68□□□□□ -0.54
NPAS4-201ENST00000311034 CYTIPO60759 359 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 SERPINE2P07093 398 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 HIST1H1BP16401 226 aaKnown RBP11.67□□□□□ -0.54
NPAS4-201ENST00000311034 GLIPR1P48060 266 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 UCP2P55851 309 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 CLDN15P56746 228 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 ERVS71-1P61550 626 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 LYSMD4Q5XG99 296 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 RFESDQ8TAC1 157 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 FGFBP3Q8TAT2 258 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 ABHD5Q8WTS1 349 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 IGKV1D-13A0A0B4J2D9 117 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 IGKV1-13P0DP09 117 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 FOXG1P55316 489 aaPredicted RBP11.67□□□□□ -0.54
NPAS4-201ENST00000311034 PMP22Q01453 160 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 ZNF92Q03936 586 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 MRPL21Q7Z2W9 205 aaKnown RBP11.67□□□□□ -0.54
NPAS4-201ENST00000311034 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 CLDND2Q8NHS1 167 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 GNPNAT1Q96EK6 184 aaPredicted RBP11.67□□□□□ -0.54
NPAS4-201ENST00000311034 LYRM2Q9NU23 88 aaPredicted RBP11.67□□□□□ -0.54
NPAS4-201ENST00000311034 LAMP3Q9UQV4 416 aa11.67□□□□□ -0.54
NPAS4-201ENST00000311034 MRPL33O75394 65 aaKnown RBP11.66□□□□□ -0.54
NPAS4-201ENST00000311034 SNRPCP09234 159 aaKnown RBP11.66□□□□□ -0.54
NPAS4-201ENST00000311034 DEFA4P12838 97 aa11.66□□□□□ -0.54
NPAS4-201ENST00000311034 IDH3GP51553 393 aaPredicted RBP11.66□□□□□ -0.54
NPAS4-201ENST00000311034 SPANXN5Q5MJ07 72 aa11.66□□□□□ -0.54
NPAS4-201ENST00000311034 SELENOHQ8IZQ5 122 aaKnown RBP11.66□□□□□ -0.54
NPAS4-201ENST00000311034 GCNT2Q8N0V5 402 aa11.66□□□□□ -0.54
NPAS4-201ENST00000311034 TPRX1Q8N7U7 411 aa11.66□□□□□ -0.54
NPAS4-201ENST00000311034 OR1F12Q8NHA8 337 aa11.66□□□□□ -0.54
NPAS4-201ENST00000311034 NOSIPQ9Y314 301 aaKnown RBP11.66□□□□□ -0.54
NPAS4-201ENST00000311034 SIRPB1O00241 398 aa11.66□□□□□ -0.54
NPAS4-201ENST00000311034 PTBP3O95758 552 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms