RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 C10orf99Q6UWK7 81 aa15.54■□□□□ 0.08
LIME1-201ENST00000309546 AHSA2Q719I0 299 aa15.54■□□□□ 0.08
LIME1-201ENST00000309546 C8orf59Q8N0T1 100 aaPredicted RBP15.54■□□□□ 0.08
LIME1-201ENST00000309546 OR10A7Q8NGE5 316 aa15.54■□□□□ 0.08
LIME1-201ENST00000309546 MYL12BO14950 172 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 GNAO1P09471 354 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 FSTP19883 344 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 CD33P20138 364 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 CAPGP40121 348 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 RAB7AP51149 207 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 TAS2R43P59537 309 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 TCTEX1D4Q5JR98 221 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 GLIPR1L1Q6UWM5 242 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 STX19Q8N4C7 294 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 ZNF485Q8NCK3 441 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 MYDGFQ969H8 173 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 ARL11Q969Q4 196 aa15.53■□□□□ 0.08
LIME1-201ENST00000309546 MRPS28Q9Y2Q9 187 aaKnown RBP15.53■□□□□ 0.08
LIME1-201ENST00000309546 IGHV3-43A0A0B4J1X8 118 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 FAM90A18PA6NE21 464 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 FAM90A16PA6NEW6 464 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 FAM90A20PA6NIJ5 464 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 FAM90A9PA6NNJ1 464 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 FAM90A12PA8MX19 464 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 FAM90A5PA8MXJ8 464 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 AIPO00170 330 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 SDCBPO00560 298 aaPredicted RBP15.52■□□□□ 0.08
LIME1-201ENST00000309546 HSD17B6O14756 317 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 IGKV1D-33P01593 117 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 IGKV1-33P01594 117 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 PF4P02776 101 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 MAS1P04201 325 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 FAM90A15PP0C7V4 464 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 FAM90A13PP0C7W8 464 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 FAM90A14PP0C7W9 464 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 FAM90A24PP0C7X0 464 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 IGHV3-43DP0DP04 118 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 GZMHP20718 246 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 REG1BP48304 166 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 GPR176Q14439 515 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 HNF4GQ14541 408 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 AWAT2Q6E213 333 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 THNSL2Q86YJ6 484 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 OR8H3Q8N146 312 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 SGCDQ92629 289 aa15.52■□□□□ 0.08
LIME1-201ENST00000309546 CNOT2Q9NZN8 540 aaKnown RBP15.52■□□□□ 0.08
LIME1-201ENST00000309546 TSSC4Q9Y5U2 329 aaPredicted RBP15.52■□□□□ 0.08
LIME1-201ENST00000309546 TRBV5-7A0A0A0MS05 114 aa15.51■□□□□ 0.07
LIME1-201ENST00000309546 GPX5O75715 221 aa15.51■□□□□ 0.07
LIME1-201ENST00000309546 SLC16A12Q6ZSM3 486 aa15.51■□□□□ 0.07
LIME1-201ENST00000309546 MOB3BQ86TA1 216 aa15.51■□□□□ 0.07
LIME1-201ENST00000309546 BPIFB6Q8NFQ5 453 aa15.51■□□□□ 0.07
LIME1-201ENST00000309546 NOTCH3Q9UM47 2321 aa15.51■□□□□ 0.07
LIME1-201ENST00000309546 PSMB11A5LHX3 300 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 C15orf65H3BRN8 121 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 CCRL2O00421 344 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 CELP19835 753 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 WNT4P56705 351 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 LAIR2Q6ISS4 152 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 FAM53AQ6NSI3 398 aaPredicted RBP15.5■□□□□ 0.07
LIME1-201ENST00000309546 ZNF497Q6ZNH5 498 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 C5orf56Q8N8D9 126 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 PHF21AQ96BD5 680 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 DERL3Q96Q80 235 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 BANF2Q9H503 90 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 SPACA1Q9HBV2 294 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 GFOD1Q9NXC2 390 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 PSORS1C1Q9UIG5 152 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 TRAPPC2LQ9UL33 140 aa15.5■□□□□ 0.07
LIME1-201ENST00000309546 IGHV3-72A0A0B4J1Y9 119 aa15.49■□□□□ 0.07
LIME1-201ENST00000309546 MCRIP1C9JLW8 97 aa15.49■□□□□ 0.07
LIME1-201ENST00000309546 ORC5O43913 435 aa15.49■□□□□ 0.07
LIME1-201ENST00000309546 MT-ND4P03905 459 aa15.49■□□□□ 0.07
LIME1-201ENST00000309546 IGLL1P15814 213 aa15.49■□□□□ 0.07
LIME1-201ENST00000309546 OGFRL1Q5TC84 451 aaPredicted RBP15.49■□□□□ 0.07
LIME1-201ENST00000309546 RAB12Q6IQ22 244 aa15.49■□□□□ 0.07
LIME1-201ENST00000309546 REC114Q7Z4M0 266 aa15.49■□□□□ 0.07
LIME1-201ENST00000309546 OR4K15Q8NH41 348 aa15.49■□□□□ 0.07
LIME1-201ENST00000309546 SELENOIQ9C0D9 397 aa15.49■□□□□ 0.07
LIME1-201ENST00000309546 ETAA1Q9NY74 926 aa15.49■□□□□ 0.07
LIME1-201ENST00000309546 IGHV1-3A0A0C4DH29 117 aa15.48■□□□□ 0.07
LIME1-201ENST00000309546 CRTAPO75718 401 aaPredicted RBP15.48■□□□□ 0.07
LIME1-201ENST00000309546 GAPDHP04406 335 aaKnown RBP15.48■□□□□ 0.07
LIME1-201ENST00000309546 MGMTP16455 207 aa15.48■□□□□ 0.07
LIME1-201ENST00000309546 ZNF816Q0VGE8 651 aaPredicted RBP15.48■□□□□ 0.07
LIME1-201ENST00000309546 DOC2BQ14184 412 aa15.48■□□□□ 0.07
LIME1-201ENST00000309546 ZNF329Q86UD4 541 aa15.48■□□□□ 0.07
LIME1-201ENST00000309546 PRR18Q8N4B5 295 aa15.48■□□□□ 0.07
LIME1-201ENST00000309546 OR52M1Q8NGK5 317 aa15.48■□□□□ 0.07
LIME1-201ENST00000309546 MRAPQ8TCY5 172 aa15.48■□□□□ 0.07
LIME1-201ENST00000309546 MRPS24Q96EL2 167 aaKnown RBP15.48■□□□□ 0.07
LIME1-201ENST00000309546 NOL4LQ96MY1 436 aaPredicted RBP15.48■□□□□ 0.07
LIME1-201ENST00000309546 NECAP2Q9NVZ3 263 aa15.48■□□□□ 0.07
LIME1-201ENST00000309546 RCC2Q9P258 522 aaKnown RBP15.48■□□□□ 0.07
LIME1-201ENST00000309546 SERPINE3A8MV23 424 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 CASQ2O14958 399 aaPredicted RBP15.47■□□□□ 0.07
LIME1-201ENST00000309546 PIN1P1O15428 100 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 FGF16O43320 207 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 IL3RAP26951 378 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 VHLP40337 213 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms