RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 OR2A2Q6IF42 318 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 TGIF2LXQ8IUE1 241 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 VN1R17PQ8TDU5 208 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 RHNO1Q9BSD3 238 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 MRPL32Q9BYC8 188 aaKnown RBP4.65□□□□□ -1.67
SCN1A-201ENST00000303395 RAB1BQ9H0U4 201 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 PSG11Q9UQ72 335 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF236Q9UL36 1845 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 DCTN6O00399 190 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 RHBDL1O75783 438 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 CXCL10P02778 98 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 KLF3P57682 345 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-201ENST00000303395 PRTGQ2VWP7 1150 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 AAED1Q7RTV5 226 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 SLC36A1Q7Z2H8 476 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 OR5AS1Q8N127 324 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM99Q8N816 258 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 PCGF1Q9BSM1 259 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 RSG1Q9BU20 258 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 SLC25A18Q9H1K4 315 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 PEF1Q9UBV8 284 aaKnown RBP4.65□□□□□ -1.67
SCN1A-201ENST00000303395 MKRN2OSH3BPM6 223 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 H7C2G1 150 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 NXPH3O95157 252 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 GNG4P50150 75 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 PRRX1P54821 245 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 VMA21Q3ZAQ7 101 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 LINC00052Q96N35 136 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 NMNAT3Q96T66 252 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 LANCL2Q9NS86 450 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 ANK1P16157 1881 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 A0A1W2PP55 124 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 KLF4O43474 513 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 HRH1P35367 487 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 OPRK1P41145 380 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 FMODQ06828 376 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 HERPUD1Q15011 391 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF66Q6ZN08 573 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 OR4D9Q8NGE8 314 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-201ENST00000303395 RAB33BQ9H082 229 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 SERGEFQ9UGK8 458 aa4.65□□□□□ -1.67
SCN1A-201ENST00000303395 SF3B6Q9Y3B4 125 aaKnown RBP4.65□□□□□ -1.67
SCN1A-201ENST00000303395 A0A1W2PQU0 124 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PRSS38A1L453 326 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 SIGLEC5O15389 551 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ADRA2AP08913 450 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 HOXB3P14651 431 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 CAPZBP47756 277 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 RPL32P62910 135 aaKnown RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 RNPS1Q15287 305 aaKnown RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 LPAL2Q16609 132 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ANKRD55Q3KP44 614 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 OSR2Q8N2R0 312 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 OR10V1Q8NGI7 309 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 OR5AR1Q8NGP9 310 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 AQP3Q92482 292 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 IGSF23A1L1A6 192 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ADM5C9JUS6 153 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 SLC25A17O43808 307 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 TBX18O95935 607 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 MGPP08493 103 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF888P0CJ79 500 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ELNP15502 786 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 HIST1H1CP16403 213 aaKnown RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 OTX1P32242 354 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 CYB561P49447 251 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 UCP2P55851 309 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 HYAL1Q12794 435 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 Q6ZSR6 202 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 WFDC8Q8IUA0 241 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 DIRC2Q96SL1 478 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 SH2D2AQ9NP31 389 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PATJQ8NI35 1801 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 H0YGG7 62 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 CRYAAP02489 173 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 OR4A8P0C604 315 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 CEACAM1P13688 526 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 TNFRSF1AP19438 455 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 HOXA5P20719 270 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PPP1R1AQ13522 171 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PAPPA-AS1Q5QFB9 102 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 LEMD1Q68G75 181 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 CALHM1Q8IU99 346 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF511Q8NB15 262 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 CYB561A3Q8NBI2 242 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 NOXO1Q8NFA2 376 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM255BQ8WV15 326 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 MCHR2Q969V1 340 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ADAT1Q9BUB4 502 aaKnown RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PBOV1Q9GZY1 135 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 C12orf49Q9H741 205 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 TRAPPC1Q9Y5R8 145 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF646O15015 1829 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 MYLKQ15746 1914 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM30CPA0ZSE6 113 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM262E9PQX1 116 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 RER1O15258 196 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PPIHO43447 177 aaKnown RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 WNT1P04628 370 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms