RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 LRRC61Q9BV99 259 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 SIRT7Q9NRC8 400 aa9.16□□□□□ -0.94
CLIP1-201ENST00000302528 A0A0A6YYD5 115 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 PRF1P14222 555 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 GABRG2P18507 467 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 SPINK2P20155 84 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 VDAC1P21796 283 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 ZNF770Q6IQ21 691 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-201ENST00000302528 GVQW1Q8N7I0 195 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 CDX2Q99626 313 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-201ENST00000302528 RTN4RQ9BZR6 473 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 AURKAIP1Q9NWT8 199 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-201ENST00000302528 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 METTL12A8MUP2 240 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 ZFPL1O95159 310 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 CDX1P47902 265 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-201ENST00000302528 IL11RAQ14626 422 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 MRGPRGQ86SM5 289 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 PAXXQ9BUH6 204 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 BEX4Q9NWD9 120 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-201ENST00000302528 CLN8Q9UBY8 286 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 OR2W1Q9Y3N9 320 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 GLULP15104 373 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 CKS2P33552 79 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 MFAP2P55001 183 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 SLC35B1P78383 322 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 SSPNQ14714 243 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 C2orf83Q53S99 150 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 SIGLEC7Q9Y286 467 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 ASB1Q9Y576 335 aa9.15□□□□□ -0.94
CLIP1-201ENST00000302528 TRAV8-7A0A075B6U6 113 aa9.15□□□□□ -0.95
CLIP1-201ENST00000302528 SMIM6P0DI80 62 aa9.15□□□□□ -0.95
CLIP1-201ENST00000302528 HMGA1P17096 107 aaKnown RBP9.15□□□□□ -0.95
CLIP1-201ENST00000302528 HYAL1Q12794 435 aa9.15□□□□□ -0.95
CLIP1-201ENST00000302528 GAPTQ8N292 157 aa9.15□□□□□ -0.95
CLIP1-201ENST00000302528 TMEM171Q8WVE6 324 aa9.15□□□□□ -0.95
CLIP1-201ENST00000302528 PTP4A1Q93096 173 aa9.15□□□□□ -0.95
CLIP1-201ENST00000302528 CNTRLQ7Z7A1 2325 aa9.15□□□□□ -0.95
CLIP1-201ENST00000302528 PRSS12P56730 875 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 FOXC2Q99958 501 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 PRR13Q9NZ81 148 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 SPTY2D1-AS1A0A0U1RR47 76 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 SOX8P57073 446 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 SCAND1P57086 179 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 C12orf73Q69YU5 71 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 MAFAQ8NHW3 353 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-201ENST00000302528 RAX2Q96IS3 184 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 GHITMQ9H3K2 345 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 GLRX2Q9NS18 164 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 MIOXQ9UGB7 285 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 DLEC1Q9Y238 1755 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 C7orf77A4D0Y5 90 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 ANKRD37Q7Z713 158 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 NUBPLQ8TB37 319 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 SFRP2Q96HF1 295 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 A0A1W2PS18 150 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 H3BQ15 152 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 CDIPTO14735 213 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 FFAR1O14842 300 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 PLPP2O43688 288 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 HYPMO75409 117 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 HOXC4P09017 264 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-201ENST00000302528 SRD5A2P31213 254 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 GUSBP11Q6P575 273 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 GPA33Q99795 319 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 C11orf68Q9H3H3 251 aaKnown RBP9.14□□□□□ -0.95
CLIP1-201ENST00000302528 IL20Q9NYY1 176 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 SELENOPP49908 381 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 RAG2P55895 527 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 CBLN2Q8IUK8 224 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 FGF14Q92915 247 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 GEMIN7Q9H840 131 aaKnown RBP9.14□□□□□ -0.95
CLIP1-201ENST00000302528 CCL28Q9NRJ3 127 aa9.14□□□□□ -0.95
CLIP1-201ENST00000302528 A8MWL6 223 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 J3QR06 171 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 SYNGR1O43759 233 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 NPBWR2P48146 333 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 FAM109BQ6ICB4 259 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-201ENST00000302528 FAHD2BQ6P2I3 314 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-201ENST00000302528 MTURNQ8N3F0 131 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 OR4C13Q8NGP0 309 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 RAB33BQ9H082 229 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 MS4A5Q9H3V2 200 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 A0A1B0GTH9 108 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 HMSDA8MTL9 139 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 AGFG2O95081 481 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 SURF2Q15527 256 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-201ENST00000302528 OR8G5Q8NG78 346 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 PARP11Q9NR21 331 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 TINAGQ9UJW2 476 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 OR51B2Q9Y5P1 312 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 CTXND1A0A1B0GTU2 59 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 CGB1A6NKQ9 187 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 TMEM262E9PQX1 116 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 PF4V1P10720 104 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 C12orf54Q6X4T0 127 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 BEND2Q8NDZ0 799 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 MRGPRFQ96AM1 343 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 AQP10Q96PS8 301 aa9.13□□□□□ -0.95
CLIP1-201ENST00000302528 NUDT16L1Q9BRJ7 211 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms