RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 C12orf4Q9NQ89 552 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 INSIG2Q9Y5U4 225 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 LINC00312Q9Y6C7 94 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 KIAA2026Q5HYC2 2103 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 HIVEP1P15822 2718 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 IGHV2-70DA0A0C4DH43 119 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 B4DSR2 109 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 GABARAPH6UMI1 98 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 GSTZ1O43708 216 aaPredicted RBP7.78□□□□□ -1.16
RFX3-201ENST00000302303 ORC5O43913 435 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 FOXH1O75593 365 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 MSMBP08118 114 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 SCTP09683 121 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 PPIAL4GP0DN37 164 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 DTYMKP23919 212 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 PTBP1P26599 531 aaKnown RBP eCLIP7.78□□□□□ -1.163e-8■■■■■ 30.9
RFX3-201ENST00000302303 PRSS3P35030 304 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 SSTR5P35346 364 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 ARFRP1Q13795 201 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 IL18Q14116 193 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 BAK1Q16611 211 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 FAM131AQ6UXB0 335 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 HOGA1Q86XE5 327 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 UBALD1Q8TB05 177 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 SMIM4Q8WVI0 70 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 TNFRSF14Q92956 283 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 TRIM63Q969Q1 353 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 PHF21AQ96BD5 680 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 DMRTB1Q96MA1 342 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 SIRPDQ9H106 197 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 RIMS4Q9H426 269 aaPredicted RBP7.78□□□□□ -1.16
RFX3-201ENST00000302303 MTFP1Q9UDX5 166 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 OPN4Q9UHM6 478 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 UBE2J1Q9Y385 318 aaPredicted RBP7.78□□□□□ -1.16
RFX3-201ENST00000302303 ACANP16112 2415 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 KBTBD11-OT1A0A1B0GTJ5 212 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 hADV38S2A0JD32 116 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 SULT1C2O00338 296 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 FCER2P06734 321 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 CD3GP09693 182 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 GSTT2P0CG29 244 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 GSTT2BP0CG30 244 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 ZNF728P0DKX0 622 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 GZMHP20718 246 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 OMGP23515 440 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 TALDO1P37837 337 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 LOXL3P58215 753 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 GNG2P59768 71 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 ARF6P62330 175 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 PITPNAQ00169 270 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 ZNF45Q02386 682 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 DMRTA1Q5VZB9 504 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 CD276Q5ZPR3 534 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 OR52W1Q6IF63 320 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 HCP5Q6MZN7 132 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 TRAPPC6BQ86SZ2 158 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 LINC01356Q8N9X3 169 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 OR1L1Q8NH94 360 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 RFESDQ8TAC1 157 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 SMR3AQ99954 134 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 ST6GALNAC5Q9BVH7 336 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 TMPRSS13Q9BYE2 586 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 SCPEP1Q9HB40 452 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 TAF9BQ9HBM6 251 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 TAS2R3Q9NYW6 316 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 OR6C3Q9NZP0 311 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 TRAPPC2LQ9UL33 140 aa7.78□□□□□ -1.16
RFX3-201ENST00000302303 FUOMA2VDF0 154 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 ZNF729A6NN14 1252 aaPredicted RBP7.77□□□□□ -1.17
RFX3-201ENST00000302303 TRDCB7Z8K6 153 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 F2RL2O00254 374 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 SMAD7O15105 426 aaKnown RBP7.77□□□□□ -1.17
RFX3-201ENST00000302303 HBZP02008 142 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 LPLP06858 475 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 LIPFP07098 398 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 GLP1RP43220 463 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 IFITM3Q01628 133 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 PRB3Q04118 309 aaPredicted RBP7.77□□□□□ -1.17
RFX3-201ENST00000302303 IGSF11Q5DX21 431 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 RNASE12Q5GAN4 147 aaKnown RBP7.77□□□□□ -1.17
RFX3-201ENST00000302303 SPANXN2Q5MJ10 180 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 C1orf122Q6ZSJ8 110 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 ZNF554Q86TJ5 538 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 LDLRAD3Q86YD5 345 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 FAM185AQ8N0U4 392 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 ZNF565Q8N9K5 539 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 TMEM186Q96B77 213 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 KIRREL1Q96J84 757 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 TBX15Q96SF7 602 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 UNKLQ9H9P5 680 aaKnown RBP7.77□□□□□ -1.17
RFX3-201ENST00000302303 HIF1ANQ9NWT6 349 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 CALYQ9NYX4 217 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 RABL2AQ9UBK7 228 aaPredicted RBP7.77□□□□□ -1.17
RFX3-201ENST00000302303 LPAR3Q9UBY5 353 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 RABL2BQ9UNT1 228 aa7.77□□□□□ -1.17
RFX3-201ENST00000302303 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.77□□□□□ -1.17
RFX3-201ENST00000302303 ABCA1O95477 2261 aa7.76□□□□□ -1.17
RFX3-201ENST00000302303 TRGV10A0A0A0MS01 117 aa7.76□□□□□ -1.17
RFX3-201ENST00000302303 TRAV20A0A0B4J274 112 aa7.76□□□□□ -1.17
RFX3-201ENST00000302303 J3QRK9 145 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms