RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 OR2W1Q9Y3N9 320 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 TNRC18O15417 2968 aaPredicted RBP11.62□□□□□ -0.55
CDH8-201ENST00000299345 SNRNP70P08621 437 aaKnown RBP11.62□□□□□ -0.55
CDH8-201ENST00000299345 DANCRP0C864 163 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 HLA-DRB3P79483 266 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 IL24Q13007 206 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 ALKBH2Q6NS38 261 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 Q6ZPA2 131 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 OR5C1Q8NGR4 320 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 OR1J1Q8NGS3 322 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 SNIP1Q8TAD8 396 aaKnown RBP11.62□□□□□ -0.55
CDH8-201ENST00000299345 C3orf80F5H4A9 247 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 RND3P61587 244 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 RPL23AP62750 156 aaKnown RBP11.62□□□□□ -0.55
CDH8-201ENST00000299345 FAM180AQ6UWF9 173 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 Q6ZS49 121 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 DMBX1Q8NFW5 382 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 OR4D5Q8NGN0 318 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 BOD1Q96IK1 185 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 TMEM56Q96MV1 263 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 PKIBQ9C010 78 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 PPP1R3CQ9UQK1 317 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 TMEM56-RWDD3S4R434 201 aa11.62□□□□□ -0.55
CDH8-201ENST00000299345 PGLYRP1O75594 196 aaPredicted RBP11.61□□□□□ -0.55
CDH8-201ENST00000299345 RAB2AP61019 212 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 IGFBP7Q16270 282 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 AKR1C8PQ5T2L2 129 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 TMEM252Q8N6L7 170 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 GINS3Q9BRX5 216 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 SMCO4Q9NRQ5 59 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 KCNIP1Q9NZI2 227 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 CNOT1A5YKK6 2376 aaKnown RBP11.61□□□□□ -0.55
CDH8-201ENST00000299345 CDIPTO14735 213 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 CHST1O43916 411 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 IFNA5P01569 189 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 F2RP25116 425 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 HERPUD1Q15011 391 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 OR8G1Q15617 311 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 SRSF7Q16629 238 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDH8-201ENST00000299345 PLA2G2CQ5R387 149 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 Q8IYB0 196 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 MRPL30Q8TCC3 161 aaKnown RBP11.61□□□□□ -0.55
CDH8-201ENST00000299345 GMPPAQ96IJ6 420 aaPredicted RBP11.61□□□□□ -0.55
CDH8-201ENST00000299345 CACFD1Q9UGQ2 172 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 KIAA1549Q9HCM3 1950 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 PCNX2A6NKB5 2137 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.61□□□□□ -0.55
CDH8-201ENST00000299345 H3BP45 60 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 SH2D1BO14796 132 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 WDR1O75083 606 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 SPP1P10451 314 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 AKR1C3P42330 323 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 SOX8P57073 446 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 OR10V1Q8NGI7 309 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 SPRR3Q9UBC9 169 aa11.61□□□□□ -0.55
CDH8-201ENST00000299345 TRAV24A0A0B4J272 114 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 DUXBA0A1W2PPF3 345 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 UCP1P25874 307 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 ZNF175Q9Y473 711 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 TTC28Q96AY4 2481 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 H0Y980 276 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 RNFT1Q5M7Z0 435 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 AVPI1Q5T686 147 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 DHRS7BQ6IAN0 325 aaPredicted RBP11.6□□□□□ -0.55
CDH8-201ENST00000299345 LFNGQ8NES3 379 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 USB1Q9BQ65 265 aaKnown RBP11.6□□□□□ -0.55
CDH8-201ENST00000299345 ATP6V0CP27449 155 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 SLC25A40Q8TBP6 338 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 GTF3AQ92664 365 aaKnown RBP11.6□□□□□ -0.55
CDH8-201ENST00000299345 C20orf24Q9BUV8 137 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 OR51I2Q9H344 312 aa11.6□□□□□ -0.55
CDH8-201ENST00000299345 IGSF23A1L1A6 192 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 TUSC2O75896 110 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 CD5P06127 495 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 OR5D13Q8NGL4 314 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 PRELID3BQ9Y3B1 194 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 SVILO95425 2214 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 IGKV1-6A0A0C4DH72 117 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 LRP5LA4QPB2 252 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 UMAD1C9J7I0 102 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 CELA3BP08861 270 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 ZNF806P0C7X5 589 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 OR13C7P0DN81 318 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 SNCAP37840 140 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 MDH2P40926 338 aaKnown RBP11.59□□□□□ -0.55
CDH8-201ENST00000299345 DYNLT3P51808 116 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 MOB1BQ7L9L4 216 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 SCCPDHQ8NBX0 429 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 SCGB1C1Q8TD33 95 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 GNPNAT1Q96EK6 184 aaPredicted RBP11.59□□□□□ -0.55
CDH8-201ENST00000299345 C14orf79Q96F83 325 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 LYRM2Q9NU23 88 aaPredicted RBP11.59□□□□□ -0.55
CDH8-201ENST00000299345 PLA2G2EQ9NZK7 142 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 ZDHHC8Q9ULC8 765 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 NKX2-8O15522 239 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 PSG2P11465 335 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 C20orf204Q6ZNR8 217 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 OR1A1Q9P1Q5 309 aa11.59□□□□□ -0.55
CDH8-201ENST00000299345 PCP4L1A6NKN8 68 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms