RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 OPN4Q9UHM6 478 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 ELF5Q9UKW6 265 aaPredicted RBP17.44■□□□□ 0.38
SMCO4-201ENST00000298966 PPP1R3CQ9UQK1 317 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 WIPI2Q9Y4P8 454 aa17.44■□□□□ 0.38
SMCO4-201ENST00000298966 IGHV1-69-2A0A0G2JMI3 117 aa17.43■□□□□ 0.38
SMCO4-201ENST00000298966 CD74P04233 296 aa17.43■□□□□ 0.38
SMCO4-201ENST00000298966 LMO1P25800 156 aa17.43■□□□□ 0.38
SMCO4-201ENST00000298966 ZFP36P26651 326 aaKnown RBP17.43■□□□□ 0.38
SMCO4-201ENST00000298966 BCAP31P51572 246 aa17.43■□□□□ 0.38
SMCO4-201ENST00000298966 MEF2DQ14814 521 aa17.43■□□□□ 0.38
SMCO4-201ENST00000298966 ZNF826PQ6ZT77 177 aa17.43■□□□□ 0.38
SMCO4-201ENST00000298966 RAB1CQ92928 201 aa17.43■□□□□ 0.38
SMCO4-201ENST00000298966 C12orf4Q9NQ89 552 aa17.43■□□□□ 0.38
SMCO4-201ENST00000298966 NUBP2Q9Y5Y2 271 aa17.43■□□□□ 0.38
SMCO4-201ENST00000298966 FUOMA2VDF0 154 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 MEIS3P1A6NDR6 274 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 DNAJC9-AS1A6NH13 148 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 ZNF736B4DX44 427 aaPredicted RBP17.42■□□□□ 0.38
SMCO4-201ENST00000298966 ZMYND11Q15326 602 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 STEAP1BQ6NZ63 245 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 Q6P435 159 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 RTN4RL2Q86UN3 420 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 HOGA1Q86XE5 327 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 GCSAMQ8N6F7 178 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 OR4C16Q8NGL9 310 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 SULT4A1Q9BR01 284 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 MMP28Q9H239 520 aa17.42■□□□□ 0.38
SMCO4-201ENST00000298966 HAND1O96004 215 aa17.41■□□□□ 0.38
SMCO4-201ENST00000298966 ZNF44P15621 663 aa17.41■□□□□ 0.38
SMCO4-201ENST00000298966 TAS2R46P59540 309 aa17.41■□□□□ 0.38
SMCO4-201ENST00000298966 BTG1P62324 171 aa17.41■□□□□ 0.38
SMCO4-201ENST00000298966 HFEQ30201 348 aa17.41■□□□□ 0.38
SMCO4-201ENST00000298966 PPP1R35Q8TAP8 253 aa17.41■□□□□ 0.38
SMCO4-201ENST00000298966 FAAP24Q9BTP7 215 aa17.41■□□□□ 0.38
SMCO4-201ENST00000298966 AK3Q9UIJ7 227 aa17.41■□□□□ 0.38
SMCO4-201ENST00000298966 MGAT4AQ9UM21 535 aa17.41■□□□□ 0.38
SMCO4-201ENST00000298966 TRBV6-6A0A0A6YYG2 114 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 OR2H2O95918 312 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 CD3DP04234 171 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 TCRBP04435 133 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 MUC1P15941 1255 aaPredicted RBP17.4■□□□□ 0.38
SMCO4-201ENST00000298966 SNU13P55769 128 aaKnown RBP17.4■□□□□ 0.38
SMCO4-201ENST00000298966 RAG2P55895 527 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 LCN2P80188 198 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 BAMBIQ13145 260 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 Q6ZS49 121 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 BTN2A1Q7KYR7 527 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 SUMF2Q8NBJ7 301 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 NEK7Q8TDX7 302 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 DPCDQ9BVM2 203 aaPredicted RBP17.4■□□□□ 0.38
SMCO4-201ENST00000298966 DNAJB11Q9UBS4 358 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 NUP50Q9UKX7 468 aa17.4■□□□□ 0.38
SMCO4-201ENST00000298966 IGHV3-64DA0A0J9YX35 117 aa17.39■□□□□ 0.37
SMCO4-201ENST00000298966 FSTL3O95633 263 aa17.39■□□□□ 0.37
SMCO4-201ENST00000298966 RAB3DO95716 219 aa17.39■□□□□ 0.37
SMCO4-201ENST00000298966 PAN3Q58A45 887 aaKnown RBP17.39■□□□□ 0.37
SMCO4-201ENST00000298966 RSBN1Q5VWQ0 802 aaPredicted RBP17.39■□□□□ 0.37
SMCO4-201ENST00000298966 BATF2Q8N1L9 274 aa17.39■□□□□ 0.37
SMCO4-201ENST00000298966 UPRTQ96BW1 309 aa17.39■□□□□ 0.37
SMCO4-201ENST00000298966 IL36RNQ9UBH0 155 aa17.39■□□□□ 0.37
SMCO4-201ENST00000298966 WNK1Q9H4A3 2382 aa17.39■□□□□ 0.37
SMCO4-201ENST00000298966 TRAV24A0A0B4J272 114 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 SLC33A1O00400 549 aaPredicted RBP17.38■□□□□ 0.37
SMCO4-201ENST00000298966 RNASE1P07998 156 aaKnown RBP17.38■□□□□ 0.37
SMCO4-201ENST00000298966 CCR6P51684 374 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 PAX5Q02548 391 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 MICBQ29980 383 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 TUSC1Q2TAM9 212 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 RNASE10Q5GAN6 216 aaKnown RBP17.38■□□□□ 0.37
SMCO4-201ENST00000298966 VAX1Q5SQQ9 334 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 TEX36Q5VZQ5 186 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 MOB1BQ7L9L4 216 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 CADM3Q8N126 398 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 BEST4Q8NFU0 473 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 CHAC2Q8WUX2 184 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 DNTTIP1Q9H147 329 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 MCUBQ9NWR8 336 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 ETAA1Q9NY74 926 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 ZNF69Q9UC07 566 aa17.38■□□□□ 0.37
SMCO4-201ENST00000298966 PPIAL4EA0A075B759 164 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 PPIAL4CA0A0B4J2A2 164 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 OR2AT4A6NND4 320 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 DISC1C4P0D8 188 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 PPIAL4DF5H284 164 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 INMT-MINDY4F8WBC2 141 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.37■□□□□ 0.37
SMCO4-201ENST00000298966 FOXH1O75593 365 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 NAPSAO96009 420 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 CSN2P05814 226 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 FCGR3AP08637 254 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 PPIAL4FP0DN26 164 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 AMY2BP19961 511 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 KCNJ8Q15842 424 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 GAPTQ8N292 157 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 ARRDC1Q8N5I2 433 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 GVQW1Q8N7I0 195 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 OR56B4Q8NH76 319 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 SNAPC3Q92966 411 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 PRRT1Q99946 306 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 WDR13Q9H1Z4 485 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms