RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 R3HDM4Q96D70 268 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 THOC3Q96J01 351 aaKnown RBP13.42□□□□□ -0.26
UBAP1-201ENST00000297661 ADGRG7Q96K78 797 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 CBLN4Q9NTU7 201 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 A0A0U1RQV5 110 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 A0A1B0GU03 582 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 LOC102725191A0A1B0GVB3 256 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 ZNF850A8MQ14 1090 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 SERPINE3A8MV23 424 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 M0R143 59 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 CYB5R3P00387 301 aaPredicted RBP13.41□□□□□ -0.26
UBAP1-201ENST00000297661 CTSSP25774 331 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 NOVA1P51513 510 aaKnown RBP13.41□□□□□ -0.26
UBAP1-201ENST00000297661 SSR4P51571 173 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 GNMTQ14749 295 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 PHLDA2Q53GA4 152 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 SP5Q6BEB4 398 aaPredicted RBP13.41□□□□□ -0.26
UBAP1-201ENST00000297661 ABLIM2Q6H8Q1 611 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 OR2C3Q8N628 320 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 SLC35G3Q8N808 338 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 PP6455Q8WZ26 134 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 TMEM242Q9NWH2 141 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 SLC7A11Q9UPY5 501 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 AHCTF1Q8WYP5 2266 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 RAB11AP62491 216 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 COL10A1Q03692 680 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 ABCA11PQ4W5N1 156 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 IMMP1LQ96LU5 166 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 Q96M66 194 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 DECR2Q9NUI1 292 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 CFAP47Q6ZTR5 3102 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 RRP8O43159 456 aaKnown RBP13.41□□□□□ -0.26
UBAP1-201ENST00000297661 OR4A8P0C604 315 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 TDGF1P3P51864 188 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 DSCR4P56555 118 aaPredicted RBP13.41□□□□□ -0.26
UBAP1-201ENST00000297661 HNF4GQ14541 408 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 SLC16A14Q7RTX9 510 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 RPS19BP1Q86WX3 136 aaKnown RBP13.41□□□□□ -0.26
UBAP1-201ENST00000297661 OR10A7Q8NGE5 316 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 FGFBP3Q8TAT2 258 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 SPTSSAQ969W0 71 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 TM2D1Q9BX74 207 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 ANGPTL4Q9BY76 406 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 GOLT1BQ9Y3E0 138 aa13.41□□□□□ -0.26
UBAP1-201ENST00000297661 AKAP13Q12802 2813 aa13.4□□□□□ -0.26
UBAP1-201ENST00000297661 HSPA12AO43301 675 aa13.4□□□□□ -0.26
UBAP1-201ENST00000297661 SPINK2P20155 84 aa13.4□□□□□ -0.26
UBAP1-201ENST00000297661 LIAT1Q6ZQX7 453 aa13.4□□□□□ -0.26
UBAP1-201ENST00000297661 TMEM171Q8WVE6 324 aa13.4□□□□□ -0.26
UBAP1-201ENST00000297661 RBMXL1Q96E39 390 aaKnown RBP13.4□□□□□ -0.26
UBAP1-201ENST00000297661 C18orf12Q96KH6 178 aa13.4□□□□□ -0.26
UBAP1-201ENST00000297661 ANXA10Q9UJ72 324 aa13.4□□□□□ -0.26
UBAP1-201ENST00000297661 ZFHX4Q86UP3 3567 aa13.4□□□□□ -0.26
UBAP1-201ENST00000297661 IGSF23A1L1A6 192 aa13.4□□□□□ -0.27
UBAP1-201ENST00000297661 XKRY2A2RUG3 117 aa13.4□□□□□ -0.27
UBAP1-201ENST00000297661 TK1P04183 234 aa13.4□□□□□ -0.27
UBAP1-201ENST00000297661 MMP7P09237 267 aaPredicted RBP13.4□□□□□ -0.27
UBAP1-201ENST00000297661 RFPL3SP0C7P2 107 aa13.4□□□□□ -0.27
UBAP1-201ENST00000297661 ZNF728P0DKX0 622 aa13.4□□□□□ -0.27
UBAP1-201ENST00000297661 OTX1P32242 354 aaPredicted RBP13.4□□□□□ -0.27
UBAP1-201ENST00000297661 FAM90A2PQ658T7 463 aa13.4□□□□□ -0.27
UBAP1-201ENST00000297661 OR5L1Q8NGL2 311 aa13.4□□□□□ -0.27
UBAP1-201ENST00000297661 HIST1H2AAQ96QV6 131 aa13.4□□□□□ -0.27
UBAP1-201ENST00000297661 SYT3Q9BQG1 590 aa13.4□□□□□ -0.27
UBAP1-201ENST00000297661 TMEM208Q9BTX3 173 aa13.4□□□□□ -0.27
UBAP1-201ENST00000297661 IGKV1-12A0A0C4DH73 117 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 IGKV1D-12P01611 117 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 OPN1MWP04001 364 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 JMJD7P0C870 316 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 OPN1MW2P0DN77 364 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 OPN1MW3P0DN78 364 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 ZNF32P17041 273 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 ALDH3B1P43353 468 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 RUNX1Q01196 453 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 PAX5Q02548 391 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 RAB35Q15286 201 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 OR11L1Q8NGX0 322 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 FAM122AQ96E09 287 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 CALHM2Q9HA72 323 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 NCOR2Q9Y618 2525 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 CEP295Q9C0D2 2601 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 DLEU1O43261 78 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 CXCL13O43927 109 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 PITX3O75364 302 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 TRAPPC6AO75865 159 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 PNRC1Q12796 327 aaPredicted RBP13.39□□□□□ -0.27
UBAP1-201ENST00000297661 THNSL2Q86YJ6 484 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 LRTM2Q8N967 370 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 OR10J5Q8NHC4 309 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 GAB2Q9UQC2 676 aa13.39□□□□□ -0.27
UBAP1-201ENST00000297661 NCKAP5O14513 1909 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 LOC102723996A0A087X1L8 192 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 LOC102723971A0A1B0GUV8 181 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 ONECUT2O95948 504 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 HIST1H3AP68431 136 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 C9orf135Q5VTT2 229 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 DHRS13Q6UX07 377 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 CMTM1Q8IZ96 169 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 MSI2Q96DH6 328 aaKnown RBP13.38□□□□□ -0.27
UBAP1-201ENST00000297661 IL17BQ9UHF5 180 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms