RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 SLC33A1O00400 549 aaPredicted RBP18■□□□□ 0.47
SOX17-201ENST00000297316 IGHV3-13P01766 116 aa18■□□□□ 0.47
SOX17-201ENST00000297316 CASP6P55212 293 aa18■□□□□ 0.47
SOX17-201ENST00000297316 UCP3P55916 312 aa18■□□□□ 0.47
SOX17-201ENST00000297316 KLF3P57682 345 aaPredicted RBP18■□□□□ 0.47
SOX17-201ENST00000297316 IL15RAQ13261 267 aa18■□□□□ 0.47
SOX17-201ENST00000297316 TMEM187Q14656 261 aa18■□□□□ 0.47
SOX17-201ENST00000297316 PCSK4Q6UW60 755 aa18■□□□□ 0.47
SOX17-201ENST00000297316 C1orf174Q8IYL3 243 aa18■□□□□ 0.47
SOX17-201ENST00000297316 PLPPR1Q8TBJ4 325 aa18■□□□□ 0.47
SOX17-201ENST00000297316 RSRP1Q9BUV0 290 aa18■□□□□ 0.47
SOX17-201ENST00000297316 IGKV1D-13A0A0B4J2D9 117 aa18■□□□□ 0.47
SOX17-201ENST00000297316 A8MXK9 166 aa18■□□□□ 0.47
SOX17-201ENST00000297316 LGALS8O00214 317 aa18■□□□□ 0.47
SOX17-201ENST00000297316 ABCD4O14678 606 aa18■□□□□ 0.47
SOX17-201ENST00000297316 SPDEFO95238 335 aa18■□□□□ 0.47
SOX17-201ENST00000297316 IGKV1-13P0DP09 117 aa18■□□□□ 0.47
SOX17-201ENST00000297316 BSPH1Q075Z2 132 aa18■□□□□ 0.47
SOX17-201ENST00000297316 WDR82Q6UXN9 313 aa18■□□□□ 0.47
SOX17-201ENST00000297316 OR1S1Q8NH92 325 aa18■□□□□ 0.47
SOX17-201ENST00000297316 C2orf50Q96LR7 162 aa18■□□□□ 0.47
SOX17-201ENST00000297316 RASL12Q9NYN1 266 aa18■□□□□ 0.47
SOX17-201ENST00000297316 OR5AC2Q9NZP5 309 aa18■□□□□ 0.47
SOX17-201ENST00000297316 ZNF345Q14585 488 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 CDSNQ15517 529 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 ZNF880Q6PDB4 577 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 RRNAD1Q96FB5 475 aaKnown RBP17.99■□□□□ 0.47
SOX17-201ENST00000297316 RHOFQ9HBH0 211 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 OR14J1Q9UGF5 321 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 TRBV6-6A0A0A6YYG2 114 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 A0A0D9SG52 128 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 A0A1B0GWJ7 208 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 FAM90A27PA6NNH2 459 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 OR2F2O95006 317 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 GNRHRP30968 328 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 OR2F1Q13607 317 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 RAB32Q13637 225 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 PAN3Q58A45 887 aaKnown RBP17.99■□□□□ 0.47
SOX17-201ENST00000297316 TMEM108Q6UXF1 575 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 ACOT7LQ6ZUV0 252 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 Q8IYB0 196 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 DCUN1D4Q92564 292 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 GSKIPQ9P0R6 139 aa17.99■□□□□ 0.47
SOX17-201ENST00000297316 TRBV6-7A0A0A0MS04 114 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 RLN2P04090 185 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 KCNJ3P48549 501 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 CYCSP99999 105 aaKnown RBP17.98■□□□□ 0.47
SOX17-201ENST00000297316 ZNF146Q15072 292 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 GGNBP1Q5YKI7 109 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 SLC51BQ86UW2 128 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 LDLRAD3Q86YD5 345 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 PDZD9Q8IXQ8 264 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 GALNT14Q96FL9 552 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 GPHA2Q96T91 129 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 HES4Q9HCC6 221 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 TAAR3PQ9P1P4 343 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 IGLV3-9A0A075B6K5 115 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 KIR2DS1A0A191URI9 304 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 NKX2-6A6NCS4 301 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 KRBOX1C9JBD0 128 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 SPRY3O43610 288 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 FGF2P09038 288 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 GRNP28799 593 aaKnown RBP17.98■□□□□ 0.47
SOX17-201ENST00000297316 KIR2DS4P43632 304 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 KIR2DS1Q14954 304 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 KDF1Q8NAX2 398 aaPredicted RBP17.98■□□□□ 0.47
SOX17-201ENST00000297316 SHARPINQ9H0F6 387 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 TLNRD1Q9H1K6 362 aa17.98■□□□□ 0.47
SOX17-201ENST00000297316 PKDREJQ9NTG1 2253 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 TSPAN4O14817 238 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 TUSC2O75896 110 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 TK1P04183 234 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 GLAP06280 429 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 BTN1A1Q13410 526 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 BVESQ8NE79 360 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 LHFPL5Q8TAF8 219 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 SECTM1Q8WVN6 248 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 RIMS4Q9H426 269 aaPredicted RBP17.97■□□□□ 0.47
SOX17-201ENST00000297316 ACACBO00763 2458 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 MSGN1A6NI15 193 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 BCL2L11O43521 198 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 IAH1Q2TAA2 248 aaPredicted RBP17.97■□□□□ 0.47
SOX17-201ENST00000297316 ADAM5Q6NVV9 412 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 GLYATL2Q8WU03 294 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 MSI2Q96DH6 328 aaKnown RBP17.97■□□□□ 0.47
SOX17-201ENST00000297316 FAM122AQ96E09 287 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 TP53RKQ96S44 253 aa17.97■□□□□ 0.47
SOX17-201ENST00000297316 HLA-DRB3P79483 266 aa17.96■□□□□ 0.47
SOX17-201ENST00000297316 ADORA2A-AS1P86434 159 aa17.96■□□□□ 0.47
SOX17-201ENST00000297316 ZNF818PQ6ZRF7 136 aa17.96■□□□□ 0.47
SOX17-201ENST00000297316 OR2V2Q96R30 315 aa17.96■□□□□ 0.47
SOX17-201ENST00000297316 MS4A7Q9GZW8 240 aaPredicted RBP17.96■□□□□ 0.47
SOX17-201ENST00000297316 KCNIP3Q9Y2W7 256 aa17.96■□□□□ 0.47
SOX17-201ENST00000297316 PTAFRP25105 342 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 ZNF497Q6ZNH5 498 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 LYZL2Q7Z4W2 148 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 UBALD1Q8TB05 177 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 ST8SIA2Q92186 375 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 KANTRA0A1W2PQU2 76 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 PSPNO60542 156 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms