RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ADAM20O43506 726 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 CT45A10P0DMU9 189 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 ZNF133P52736 654 aaPredicted RBP10.3□□□□□ -0.76
SNIP1-201ENST00000296215 CLDND2Q8NHS1 167 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 ZNF775Q96BV0 537 aaPredicted RBP10.3□□□□□ -0.76
SNIP1-201ENST00000296215 TAAR3PQ9P1P4 343 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 TAAR2Q9P1P5 351 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 TRAV8-7A0A075B6U6 113 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 TRAV36DV7A0A075B6V5 113 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 PSMB2P49721 201 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 EMC4Q5J8M3 183 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 LYZL2Q7Z4W2 148 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 ARHGEF39Q8N4T4 335 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 A0A1B0GWA3 101 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 ZNF324O75467 553 aaPredicted RBP10.3□□□□□ -0.76
SNIP1-201ENST00000296215 APODP05090 189 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 CELA3AP09093 270 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 SLC35E2P0CK97 266 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 TM4SF20Q53R12 229 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 FAM69BQ5VUD6 431 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 MARCH3Q86UD3 253 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 OR8A1Q8NGG7 326 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 IGSF8Q969P0 613 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 IL17FQ96PD4 163 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 RAB40CQ96S21 281 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 NXF5Q9H1B4 397 aaKnown RBP10.3□□□□□ -0.76
SNIP1-201ENST00000296215 MS4A5Q9H3V2 200 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 CLEC1BQ9P126 229 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 ZIC2O95409 532 aaPredicted RBP10.29□□□□□ -0.76
SNIP1-201ENST00000296215 GP1BBP13224 206 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 TCF23Q7RTU1 214 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 ZNF418Q8TF45 676 aaPredicted RBP10.29□□□□□ -0.76
SNIP1-201ENST00000296215 BCL2L10Q9HD36 194 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 ZNF319Q9P2F9 582 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 RBPJLQ9UBG7 517 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 ZNF638Q14966 1978 aaKnown RBP10.29□□□□□ -0.76
SNIP1-201ENST00000296215 A0A1B0GTH9 108 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 ANKRD30BLA7E2S9 258 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 TMEM250H0YL14 139 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 SIVA1O15304 175 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 NDUFB4O95168 129 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 HBZP02008 142 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 FCGR2AP12318 317 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 ANOS1P23352 680 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 CA7P43166 264 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 CCL20P78556 96 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNIP1-201ENST00000296215 C6orf15Q6UXA7 325 aaPredicted RBP10.29□□□□□ -0.76
SNIP1-201ENST00000296215 CRYBG1Q9Y4K1 1723 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 CDKN1AP38936 164 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 ALKBH6Q3KRA9 238 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 ACTL10Q5JWF8 245 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 TEX43Q6ZNM6 134 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 HOGA1Q86XE5 327 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 DOLPP1Q86YN1 238 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 OR10X1Q8NGY0 326 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 LIPHQ8WWY8 451 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 GPR132Q9UNW8 380 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 TTC3P53804 2025 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 VENTXO95231 258 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 TGFAP01135 160 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 IL2RAP01589 272 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 GNB2P62879 340 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 MYBPHQ13203 477 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 AGERQ15109 404 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 PAQR9Q6ZVX9 377 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 IL1F10Q8WWZ1 152 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 MSI2Q96DH6 328 aaKnown RBP10.29□□□□□ -0.76
SNIP1-201ENST00000296215 MAP1LC3AQ9H492 121 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 GLIPR2Q9H4G4 154 aa10.29□□□□□ -0.76
SNIP1-201ENST00000296215 MYADML2A6NDP7 307 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 C1QTNF9BB2RNN3 333 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 C9orf172C9J069 976 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 G3V4G9 280 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 TMEM252Q8N6L7 170 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 OR4A16Q8NH70 328 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 ANXA10Q9UJ72 324 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 INSIG2Q9Y5U4 225 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 COL1A1P02452 1464 aaPredicted RBP10.28□□□□□ -0.76
SNIP1-201ENST00000296215 CTXND1A0A1B0GTU2 59 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 CHST1O43916 411 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 TOMM40O96008 361 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 RPL23P62829 140 aaKnown RBP10.28□□□□□ -0.76
SNIP1-201ENST00000296215 EXOSC7Q15024 291 aaKnown RBP10.28□□□□□ -0.76
SNIP1-201ENST00000296215 CD226Q15762 336 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 PSG3Q16557 428 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 ANKRD37Q7Z713 158 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 SP8Q8IXZ3 490 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 MORN4Q8NDC4 146 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 OR2V1Q8NHB1 315 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 C1orf43Q9BWL3 253 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 PGPEP1Q9NXJ5 209 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 PGPEP1LA6NFU8 196 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 DUSP11O75319 330 aaKnown RBP10.28□□□□□ -0.76
SNIP1-201ENST00000296215 SLC38A11Q08AI6 406 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 IZUMO4Q1ZYL8 232 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 LIAT1Q6ZQX7 453 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 FGF13Q92913 245 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 OR1A2Q9Y585 309 aa10.28□□□□□ -0.76
SNIP1-201ENST00000296215 PSME4Q14997 1843 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms