RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 FGF12P61328 243 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 PSG4Q00888 419 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 ZNF154Q13106 437 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 PDPNQ86YL7 162 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 STXBP6Q8NFX7 210 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 ABHD14BQ96IU4 210 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 SLC7A10Q9NS82 523 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 GOLT1BQ9Y3E0 138 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 C16orf97H3BN30 126 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 HLA-DQB1P01920 261 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 UCNP55089 124 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 UNQ9370/PRO34162Q6UXP9 181 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 LYZL2Q7Z4W2 148 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 LYRM2Q9NU23 88 aaPredicted RBP11.15□□□□□ -0.62
PTCD1-201ENST00000292478 UBE2L3P68036 154 aaKnown RBP11.15□□□□□ -0.63
PTCD1-201ENST00000292478 CLEC9AQ6UXN8 241 aa11.15□□□□□ -0.63
PTCD1-201ENST00000292478 SFTPA2Q8IWL1 248 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 LINC00052Q96N35 136 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 LIPGQ9Y5X9 500 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 TRIP12Q14669 1992 aaPredicted RBP11.14□□□□□ -0.63
PTCD1-201ENST00000292478 FCN1O00602 326 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 CDX4O14627 284 aaPredicted RBP11.14□□□□□ -0.63
PTCD1-201ENST00000292478 PHOX2AO14813 284 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 AGFG2O95081 481 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 SFTPCP11686 197 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 FABP4P15090 132 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 PRSS12P56730 875 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 FDX2Q6P4F2 183 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 TGIF2LYQ8IUE0 185 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 TGIF2LXQ8IUE1 241 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 GHITMQ9H3K2 345 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 SYNGR1O43759 233 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 IFITM3Q01628 133 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 KRTCAP3Q53RY4 240 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 C1orf185Q5T7R7 199 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 SPRED2Q7Z698 418 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 OR2T10Q8NGZ9 312 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 C11orf94C9JXX5 98 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 GOSR1O95249 250 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 FGF8P55075 233 aaPredicted RBP11.14□□□□□ -0.63
PTCD1-201ENST00000292478 SPINK9Q5DT21 86 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 RIPPLY2Q5TAB7 128 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 SLC25A45Q8N413 288 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 SAP25Q8TEE9 199 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 FLYWCH2Q96CP2 140 aaKnown RBP11.14□□□□□ -0.63
PTCD1-201ENST00000292478 MARS2Q96GW9 593 aaKnown RBP11.14□□□□□ -0.63
PTCD1-201ENST00000292478 IFT22Q9H7X7 185 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 PRSS50Q9UI38 385 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 ELF5Q9UKW6 265 aaPredicted RBP11.14□□□□□ -0.63
PTCD1-201ENST00000292478 MS4A18H0YCH9 400 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 GAPDHP04406 335 aaKnown RBP11.14□□□□□ -0.63
PTCD1-201ENST00000292478 RPS4XP62701 263 aaKnown RBP11.14□□□□□ -0.63
PTCD1-201ENST00000292478 C19orf57Q0VDD7 668 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 MGAT2Q10469 447 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 MS4A18Q3C1V0 323 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 AWAT1Q58HT5 328 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 ZNF519Q8TB69 540 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 LPAR5Q9H1C0 372 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 PRR13Q9NZ81 148 aa11.14□□□□□ -0.63
PTCD1-201ENST00000292478 CTXND1A0A1B0GTU2 59 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 AHRRA9YTQ3 701 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 COX5BP10606 129 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 RFLNBQ8N5W9 214 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 MRGPRFQ96AM1 343 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 WIPI2Q9Y4P8 454 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 SNRPEP62304 92 aaKnown RBP11.13□□□□□ -0.63
PTCD1-201ENST00000292478 FAM181AQ8N9Y4 354 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 OR10G8Q8NGN5 311 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 OR1L1Q8NH94 360 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 LOC102723971A0A1B0GUV8 181 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 J3QR89 54 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 AP4M1O00189 453 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 LGALS7P47929 136 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 FAM214BQ7L5A3 538 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 SAXO1Q8IYX7 474 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 ADAMTS17Q8TE56 1095 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 PERPQ96FX8 193 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 PILRBQ9UKJ0 227 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 C4orf51C9J302 202 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 HPRT1P00492 218 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 GYPAP02724 150 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 IL11P20809 199 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 ANKRD55Q3KP44 614 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 OR10D4PQ8NGN7 298 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 OR1L8Q8NGR8 309 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 POM121Q96HA1 1249 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 PARD6AQ9NPB6 346 aa11.13□□□□□ -0.63
PTCD1-201ENST00000292478 ZNF71Q9NQZ8 489 aaPredicted RBP11.13□□□□□ -0.63
PTCD1-201ENST00000292478 H0Y980 276 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 CXorf1O96002 111 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 PMCHP20382 165 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 FCER1GP30273 86 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 LYZP61626 148 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 DHRS7BQ6IAN0 325 aaPredicted RBP11.12□□□□□ -0.63
PTCD1-201ENST00000292478 TMEM251Q8N6I4 163 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 PKIBQ9C010 78 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 HSF4Q9ULV5 492 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms