RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 PF4P02776 101 aa19.97■□□□□ 0.79
U2AF1-201ENST00000291552 TMEM11P17152 192 aa19.97■□□□□ 0.79
U2AF1-201ENST00000291552 RAB7AP51149 207 aa19.97■□□□□ 0.79
U2AF1-201ENST00000291552 LOXL3P58215 753 aa19.97■□□□□ 0.79
U2AF1-201ENST00000291552 KHDC1LQ5JSQ8 128 aa19.97■□□□□ 0.79
U2AF1-201ENST00000291552 SLC16A12Q6ZSM3 486 aa19.97■□□□□ 0.79
U2AF1-201ENST00000291552 LINC00596Q86U02 117 aa19.97■□□□□ 0.79
U2AF1-201ENST00000291552 NOL4LQ96MY1 436 aaPredicted RBP19.97■□□□□ 0.79
U2AF1-201ENST00000291552 TRBV5-7A0A0A0MS05 114 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 IRGMA1A4Y4 181 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 PSMB11A5LHX3 300 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 IGKV1D-33P01593 117 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 IGKV1-33P01594 117 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 CSTBP04080 98 aaKnown RBP19.96■□□□□ 0.79
U2AF1-201ENST00000291552 MYL12AP19105 171 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 ZNF816Q0VGE8 651 aaPredicted RBP19.96■□□□□ 0.79
U2AF1-201ENST00000291552 HES1Q14469 280 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 HNF4GQ14541 408 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 LRRC36Q1X8D7 754 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 MPV17LQ2QL34 196 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 SLC22A6Q4U2R8 563 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 ZNF329Q86UD4 541 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 OR10X1Q8NGY0 326 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 CYGBQ8WWM9 190 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 CYYR1Q96J86 154 aa19.96■□□□□ 0.79
U2AF1-201ENST00000291552 EBAG9O00559 213 aa19.95■□□□□ 0.78
U2AF1-201ENST00000291552 FSTP19883 344 aa19.95■□□□□ 0.78
U2AF1-201ENST00000291552 REG1BP48304 166 aa19.95■□□□□ 0.78
U2AF1-201ENST00000291552 ADARB1P78563 741 aaKnown RBP19.95■□□□□ 0.78
U2AF1-201ENST00000291552 Q499Y3 187 aa19.95■□□□□ 0.78
U2AF1-201ENST00000291552 ATAD3CQ5T2N8 411 aa19.95■□□□□ 0.78
U2AF1-201ENST00000291552 LAIR2Q6ISS4 152 aa19.95■□□□□ 0.78
U2AF1-201ENST00000291552 CCDC107Q8WV48 283 aa19.95■□□□□ 0.78
U2AF1-201ENST00000291552 GGHQ92820 318 aa19.95■□□□□ 0.78
U2AF1-201ENST00000291552 TMEM80Q96HE8 168 aa19.95■□□□□ 0.78
U2AF1-201ENST00000291552 RCC2Q9P258 522 aaKnown RBP19.95■□□□□ 0.78
U2AF1-201ENST00000291552 IGHV1-3A0A0C4DH29 117 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 FGF16O43320 207 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 SLC35A2P78381 396 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 EBI3Q14213 229 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 ZNF497Q6ZNH5 498 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 C18orf65Q6ZTR6 163 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 LINC00311Q8N616 119 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 Q8N6K4 173 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 LINC00482Q8N8I6 264 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 ARL11Q969Q4 196 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 OR14A2Q96R54 314 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 PAK1IP1Q9NWT1 392 aaPredicted RBP19.94■□□□□ 0.78
U2AF1-201ENST00000291552 GFOD1Q9NXC2 390 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 LINC00527Q9UJ94 153 aa19.94■□□□□ 0.78
U2AF1-201ENST00000291552 IGHV3-43A0A0B4J1X8 118 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 IGHV3-72A0A0B4J1Y9 119 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 MT-ND4P03905 459 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 IGHV3-43DP0DP04 118 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 GZMHP20718 246 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 KRTAP10-11P60412 298 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 YIF1BQ5BJH7 314 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 TTC23Q5W5X9 447 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 OR52M1Q8NGK5 317 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 MUL1Q969V5 352 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 S100A13Q99584 98 aa19.93■□□□□ 0.78
U2AF1-201ENST00000291552 A0A1W2PPK0 400 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 LINC01548A6NM66 108 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 K7EIL1 84 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 CCRL2O00421 344 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 SDCBPO00560 298 aaPredicted RBP19.92■□□□□ 0.78
U2AF1-201ENST00000291552 SLC31A2O15432 143 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 ORC5O43913 435 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 ZNF780AO75290 641 aaPredicted RBP19.92■□□□□ 0.78
U2AF1-201ENST00000291552 IGHG2P01859 326 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 GTF2F2P13984 249 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 RPL23AP62750 156 aaKnown RBP19.92■□□□□ 0.78
U2AF1-201ENST00000291552 LYPD6Q86Y78 171 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 IZUMO1Q8IYV9 350 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 C8orf31Q8N9H6 132 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 ST6GALNAC6Q969X2 333 aa19.92■□□□□ 0.78
U2AF1-201ENST00000291552 RBMXL1Q96E39 390 aaKnown RBP19.92■□□□□ 0.78
U2AF1-201ENST00000291552 RCC1LQ96I51 464 aaKnown RBP19.92■□□□□ 0.78
U2AF1-201ENST00000291552 EAF1Q96JC9 268 aaPredicted RBP19.92■□□□□ 0.78
U2AF1-201ENST00000291552 MRPS28Q9Y2Q9 187 aaKnown RBP19.92■□□□□ 0.78
U2AF1-201ENST00000291552 PNMA8CA0A1B0GUJ8 204 aa19.91■□□□□ 0.78
U2AF1-201ENST00000291552 MPIG6BO95866 241 aa19.91■□□□□ 0.78
U2AF1-201ENST00000291552 GNAO1P09471 354 aa19.91■□□□□ 0.78
U2AF1-201ENST00000291552 ST3GAL4Q11206 333 aa19.91■□□□□ 0.78
U2AF1-201ENST00000291552 MOB3BQ86TA1 216 aa19.91■□□□□ 0.78
U2AF1-201ENST00000291552 TMEM104Q8NE00 496 aa19.91■□□□□ 0.78
U2AF1-201ENST00000291552 NEK7Q8TDX7 302 aa19.91■□□□□ 0.78
U2AF1-201ENST00000291552 CHPT1Q8WUD6 406 aa19.91■□□□□ 0.78
U2AF1-201ENST00000291552 C12orf77C9JDV5 145 aa19.9■□□□□ 0.78
U2AF1-201ENST00000291552 AIPO00170 330 aa19.9■□□□□ 0.78
U2AF1-201ENST00000291552 GAPDHP04406 335 aaKnown RBP19.9■□□□□ 0.78
U2AF1-201ENST00000291552 GLIPR1L1Q6UWM5 242 aa19.9■□□□□ 0.78
U2AF1-201ENST00000291552 OR2W3Q7Z3T1 314 aa19.9■□□□□ 0.78
U2AF1-201ENST00000291552 MRPL41Q8IXM3 137 aaKnown RBP19.9■□□□□ 0.78
U2AF1-201ENST00000291552 GAPTQ8N292 157 aa19.9■□□□□ 0.78
U2AF1-201ENST00000291552 DHRSXQ8N5I4 330 aa19.9■□□□□ 0.78
U2AF1-201ENST00000291552 JAGN1Q8N5M9 183 aa19.9■□□□□ 0.78
U2AF1-201ENST00000291552 PACRGLQ8N7B6 248 aa19.9■□□□□ 0.78
U2AF1-201ENST00000291552 ZNF439Q8NDP4 499 aa19.9■□□□□ 0.78
U2AF1-201ENST00000291552 SETD9Q8NE22 299 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms