RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 CELA3BP08861 270 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 FBP1P09467 338 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 SNRPEP62304 92 aaKnown RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 LSM6P62312 80 aaKnown RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 RPL11P62913 178 aaKnown RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 RNPS1Q15287 305 aaKnown RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 ZNF485Q8NCK3 441 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 OR52L2PQ8NGH6 319 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 SSMEM1Q8WWF3 244 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 S1PR3Q99500 378 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 SMIM7Q9BQ49 75 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 ZNF552Q9H707 407 aaPredicted RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 STRAPQ9Y3F4 350 aaKnown RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 WNT9BO14905 357 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 SP1P08047 785 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 FCGR3AP08637 254 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 HOXD4P09016 255 aaPredicted RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 ACKR3P25106 362 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 CCL8P80075 99 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 RPL19P84098 196 aaKnown RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 MZT1Q08AG7 82 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 CXorf66Q5JRM2 361 aaPredicted RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 SLC25A47Q6Q0C1 308 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 OR2C3Q8N628 320 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 CLRN3Q8NCR9 226 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 ADAMTS17Q8TE56 1095 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 RAB33BQ9H082 229 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 ZNF581Q9P0T4 197 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 OR1A1Q9P1Q5 309 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 ZNF106Q9H2Y7 1883 aaKnown RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 CEP192Q8TEP8 1941 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 TRBV5-7A0A0A0MS05 114 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 NPIPB9F8W1W9 429 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 TOX3O15405 576 aaPredicted RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 PMELP40967 661 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 TAS2R30P59541 319 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 SMIM21Q3B7S5 101 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 STUMQ69YW2 141 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 ZPBPQ9BS86 351 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 RSG1Q9BU20 258 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 RCC2Q9P258 522 aaKnown RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 GHRLQ9UBU3 117 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 HSF4Q9ULV5 492 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 CFAP54Q96N23 3096 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 LRRC30A6NM36 301 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 C17orf112F2Z3M2 114 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 UMODP07911 640 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 NPBWR1P48145 328 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 FAM201AQ5SY85 155 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 NCMAPQ5T1S8 102 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 PRSS54Q6PEW0 395 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 HSD17B13Q7Z5P4 300 aaPredicted RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 MOB3BQ86TA1 216 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 MSI2Q96DH6 328 aaKnown RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 CMTM3Q96MX0 182 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 GPX7Q96SL4 187 aaPredicted RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 ABHD14AQ9BUJ0 271 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 TMEM30CPA0ZSE6 113 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 PINLYPA6NC86 204 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 NKX6-3A6NJ46 265 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 FIGNL2A6NMB9 653 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 RRP8O43159 456 aaKnown RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 RHBDL1O75783 438 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 HAND1O96004 215 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 CST2P09228 141 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 CPN1P15169 458 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 CHRNA7P36544 502 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 SSBP1Q04837 148 aaKnown RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 RBPJQ06330 500 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 FOXO1Q12778 655 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 ZNF660Q6AZW8 331 aaPredicted RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 JMJD6Q6NYC1 403 aaPredicted RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 ZNF429Q86V71 674 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 FGFBP3Q8TAT2 258 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 MDFIC2A0A1B0GVS7 189 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 FOXG1P55316 489 aaPredicted RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 UNQ9370/PRO34162Q6UXP9 181 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 SLC16A13Q7RTY0 426 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 BLNKQ8WV28 456 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 MISP3Q96FF7 219 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 LPAR2Q9HBW0 351 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 MMP26Q9NRE1 261 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 IGHV3-72A0A0B4J1Y9 119 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 MFSD2BA6NFX1 497 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 CBY3A6NI87 242 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 EFNA2O43921 213 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 MT-CO2P00403 227 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 OR10J4P0C629 311 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 DVL1P1P54792 670 aaPredicted RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 HOXA4Q00056 320 aaPredicted RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 RBMS3Q6XE24 437 aaKnown RBP4.14□□□□□ -1.75
UBR1-201ENST00000290650 LRRC75AQ8NAA5 344 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 SHARPINQ9H0F6 387 aa4.14□□□□□ -1.75
UBR1-201ENST00000290650 A0A1W2PPE2 198 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 TRDCB7Z8K6 153 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 PROB1E7EW31 1015 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 MKRN2OSH3BPM6 223 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 HBE1P02100 147 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 GYPAP02724 150 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 TMEM50BP56557 158 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms