RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 ARL11Q969Q4 196 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 TMEM106AQ96A25 262 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 NOL4LQ96MY1 436 aaPredicted RBP11.13□□□□□ -0.63
TPM1-202ENST00000288398 LINC00574Q9H8X3 128 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 CHCHD3Q9NX63 227 aaKnown RBP11.13□□□□□ -0.63
TPM1-202ENST00000288398 TRAV39A0A0B4J263 110 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 A0A1W2PPE3 182 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 H3BNX3 289 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 AP4M1O00189 453 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 GABRB1P18505 474 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 BDKRB2P30411 391 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 MYCNOSP40205 109 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 REG1BP48304 166 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 THBS3P49746 956 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 GTF2A1P52655 376 aaPredicted RBP11.12□□□□□ -0.63
TPM1-202ENST00000288398 GP2P55259 537 aaKnown RBP11.12□□□□□ -0.63
TPM1-202ENST00000288398 ZNF816Q0VGE8 651 aaPredicted RBP11.12□□□□□ -0.63
TPM1-202ENST00000288398 GPR176Q14439 515 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 MPV17LQ2QL34 196 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 UTF1Q5T230 341 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 C8orf86Q6ZUL3 223 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 OR2T10Q8NGZ9 312 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 LINC00527Q9UJ94 153 aa11.12□□□□□ -0.63
TPM1-202ENST00000288398 IGHV1-3A0A0C4DH29 117 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 AIPO00170 330 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 SPINT2O43291 252 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 IGHG2P01859 326 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 GTF2F2P13984 249 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 DCKP27707 260 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 RIPK1Q13546 671 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 DIAPH2-AS1Q14236 149 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 SLC22A6Q4U2R8 563 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 CXorf66Q5JRM2 361 aaPredicted RBP11.11□□□□□ -0.63
TPM1-202ENST00000288398 NHLRC3Q5JS37 347 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 ZNF529Q6P280 563 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 TEX38Q6PEX7 206 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 ZNF695Q8IW36 515 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 STPG2Q8N412 459 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 OR52M1Q8NGK5 317 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 CCDC107Q8WV48 283 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 IFT22Q9H7X7 185 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 SPACA1Q9HBV2 294 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 MRPS18AQ9NVS2 196 aaKnown RBP11.11□□□□□ -0.63
TPM1-202ENST00000288398 IL36GQ9NZH8 169 aa11.11□□□□□ -0.63
TPM1-202ENST00000288398 IGHV3-72A0A0B4J1Y9 119 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 WI2-2373I1.2A0A1W2PRP0 233 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 MCRIP1C9JLW8 97 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 GEMIN2O14893 280 aaKnown RBP11.1□□□□□ -0.63
TPM1-202ENST00000288398 TXNL1O43396 289 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 KRTAP10-11P60412 298 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 EGFEM1PQ0D2K5 195 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 PNLIPRP3Q17RR3 467 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 ASCL4Q6XD76 172 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 TGIF2LXQ8IUE1 241 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 IZUMO1Q8IYV9 350 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 Q8NFD4 153 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 EAF1Q96JC9 268 aaPredicted RBP11.1□□□□□ -0.63
TPM1-202ENST00000288398 FGF20Q9NP95 211 aaPredicted RBP11.1□□□□□ -0.63
TPM1-202ENST00000288398 LIN7CQ9NUP9 197 aaKnown RBP11.1□□□□□ -0.63
TPM1-202ENST00000288398 GNG12Q9UBI6 72 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 TRAPPC2LQ9UL33 140 aa11.1□□□□□ -0.63
TPM1-202ENST00000288398 ORC5O43913 435 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 BAG2O95816 211 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 MOSP00540 346 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 LIMS3P0CW19 117 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 LIMS4P0CW20 117 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 VDAC1P21796 283 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 GPR12P47775 334 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 DGCR2P98153 550 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 TMEM30BQ3MIR4 351 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 C6orf183Q5T699 404 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 ETV3LQ6ZN32 361 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 PRR18Q8N4B5 295 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 JAGN1Q8N5M9 183 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 OR8H1Q8NGG4 311 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 OR8U1Q8NH10 309 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 UBALD1Q8TB05 177 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 RGP1Q92546 391 aaPredicted RBP11.09□□□□□ -0.63
TPM1-202ENST00000288398 SMIM19Q96E16 107 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 ZNF184Q99676 751 aaPredicted RBP11.09□□□□□ -0.63
TPM1-202ENST00000288398 S100A14Q9HCY8 104 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 GFOD1Q9NXC2 390 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 BABAM2Q9NXR7 383 aa11.09□□□□□ -0.63
TPM1-202ENST00000288398 SMPD3Q9NY59 655 aaPredicted RBP11.09□□□□□ -0.63
TPM1-202ENST00000288398 EXOSC1Q9Y3B2 195 aaKnown RBP11.09□□□□□ -0.63
TPM1-202ENST00000288398 IGHV3-43A0A0B4J1X8 118 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 CCL24O00175 119 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 IGHV3-43DP0DP04 118 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 CD1BP29016 333 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 ETV1P50549 477 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 GABPB1Q06547 395 aaPredicted RBP11.08□□□□□ -0.64
TPM1-202ENST00000288398 GPR50Q13585 617 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 Q3ZCU0 254 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 OR2G6Q5TZ20 316 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 TRAT1Q6PIZ9 186 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 PQLC1Q8N2U9 271 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 LINC00311Q8N616 119 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 C8orf31Q8N9H6 132 aa11.08□□□□□ -0.64
TPM1-202ENST00000288398 OR5M8Q8NGP6 311 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms