RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 C19orf25Q9UFG5 118 aaPredicted RBP9.08□□□□□ -0.96
ERCC3-201ENST00000285398 PTPRBP23467 1997 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 TRAV1-1A0A0B4J248 108 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 PPP5D1E7EU14 171 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 TMEM225BP0DP42 221 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 IL11P20809 199 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 PDLIM4P50479 330 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 ZNF133P52736 654 aaPredicted RBP9.08□□□□□ -0.96
ERCC3-201ENST00000285398 CARD18P57730 90 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 FOXC1Q12948 553 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 KISS1Q15726 138 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 ZNF880Q6PDB4 577 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 GRINAQ7Z429 371 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 MRPL52Q86TS9 123 aaKnown RBP9.08□□□□□ -0.96
ERCC3-201ENST00000285398 ZNF441Q8N8Z8 693 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 SSC4DQ8WTU2 575 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 MSI2Q96DH6 328 aaKnown RBP9.08□□□□□ -0.96
ERCC3-201ENST00000285398 ZNF845Q96IR2 970 aaPredicted RBP9.08□□□□□ -0.96
ERCC3-201ENST00000285398 IMMP1LQ96LU5 166 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 ANGPTL4Q9BY76 406 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 SDF2L1Q9HCN8 221 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 CBLN4Q9NTU7 201 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 MCTS1Q9ULC4 181 aaKnown RBP9.08□□□□□ -0.96
ERCC3-201ENST00000285398 RFNGQ9Y644 331 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 NBEAQ8NFP9 2946 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 BSNQ9UPA5 3926 aa9.08□□□□□ -0.96
ERCC3-201ENST00000285398 PHF3Q92576 2039 aaKnown RBP9.08□□□□□ -0.96
ERCC3-201ENST00000285398 NPIPB13A6NJU9 1138 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 ZNF850A8MQ14 1090 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 NPIPB4C9JG80 1138 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 MS4A18H0YCH9 400 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 ATXN7O15265 892 aaPredicted RBP9.07□□□□□ -0.96
ERCC3-201ENST00000285398 CDS2O95674 445 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
ERCC3-201ENST00000285398 WT1P19544 449 aaPredicted RBP9.07□□□□□ -0.96
ERCC3-201ENST00000285398 ZP4Q12836 540 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 FOXF1Q12946 379 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 COTL1Q14019 142 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 MS4A18Q3C1V0 323 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 ZNF468Q5VIY5 522 aaPredicted RBP9.07□□□□□ -0.96
ERCC3-201ENST00000285398 DOK3Q7L591 496 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 THNSL2Q86YJ6 484 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 TGIF2LYQ8IUE0 185 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 MRPL41Q8IXM3 137 aaKnown RBP9.07□□□□□ -0.96
ERCC3-201ENST00000285398 OR10G3Q8NGC4 313 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 OR5D18Q8NGL1 313 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 OR5C1Q8NGR4 320 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 SLC2A9Q9NRM0 540 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 CISD1Q9NZ45 108 aaKnown RBP9.07□□□□□ -0.96
ERCC3-201ENST00000285398 LRFN1Q9P244 771 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 SPTA1P02549 2419 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 IGSF23A1L1A6 192 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 SMPD2O60906 423 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 CST2P09228 141 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 ZNF17P17021 662 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 OMGP23515 440 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 NKX2-1P43699 371 aaPredicted RBP9.07□□□□□ -0.96
ERCC3-201ENST00000285398 HERPUD1Q15011 391 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 C1orf194Q5T5A4 169 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 PRAMEF20Q5VT98 475 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 OR8B12Q8NGG6 310 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 OR2AJ1Q8NGZ0 328 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 TMEM171Q8WVE6 324 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 LYRM2Q9NU23 88 aaPredicted RBP9.07□□□□□ -0.96
ERCC3-201ENST00000285398 GNG13Q9P2W3 67 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 GAB2Q9UQC2 676 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 LOC102723996A0A087X1L8 192 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 IGKV1-9A0A0C4DH69 117 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 TMEM210A6NLX4 147 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 SOX15O60248 233 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 TSPAN2O60636 221 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 OR4A8P0C604 315 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 VAMP2P63027 116 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 HSF1Q00613 529 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 PMS2P11Q13670 270 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 TSPO2Q5TGU0 170 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 ZNF66Q6ZN08 573 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 C6orf201Q7Z4U5 140 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 H1FOOQ8IZA3 346 aaPredicted RBP9.07□□□□□ -0.96
ERCC3-201ENST00000285398 TMEM252Q8N6L7 170 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 OR5L1Q8NGL2 311 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 GPR119Q8TDV5 335 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 RASL10BQ96S79 203 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 P2RX4Q99571 388 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 C11orf1Q9H5F2 150 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 GPR173Q9NS66 373 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 POLR1DQ9Y2S0 133 aa9.07□□□□□ -0.96
ERCC3-201ENST00000285398 EML6Q6ZMW3 1958 aa9.06□□□□□ -0.96
ERCC3-201ENST00000285398 PHF1O43189 567 aaPredicted RBP9.06□□□□□ -0.96
ERCC3-201ENST00000285398 ZFAND5O76080 213 aa9.06□□□□□ -0.96
ERCC3-201ENST00000285398 LIFP15018 202 aa9.06□□□□□ -0.96
ERCC3-201ENST00000285398 MDKP21741 143 aaPredicted RBP9.06□□□□□ -0.96
ERCC3-201ENST00000285398 CCL1P22362 96 aa9.06□□□□□ -0.96
ERCC3-201ENST00000285398 OR3A1P47881 315 aa9.06□□□□□ -0.96
ERCC3-201ENST00000285398 ZNF121P58317 390 aaPredicted RBP9.06□□□□□ -0.96
ERCC3-201ENST00000285398 SRPXP78539 464 aa9.06□□□□□ -0.96
ERCC3-201ENST00000285398 POU3F1Q03052 451 aaPredicted RBP9.06□□□□□ -0.96
ERCC3-201ENST00000285398 BAXQ07812 192 aa9.06□□□□□ -0.96
ERCC3-201ENST00000285398 PHLDA2Q53GA4 152 aa9.06□□□□□ -0.96
ERCC3-201ENST00000285398 TMPRSS7Q7RTY8 843 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms