RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 U3KQA8 63 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 PCNX2A6NKB5 2137 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 IGHV5-10-1A0A0J9YXX1 117 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 ZNF850A8MQ14 1090 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 CYB5R3P00387 301 aaPredicted RBP8.94□□□□□ -0.98
SKA1-201ENST00000285116 COX5BP10606 129 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 NOVA1P51513 510 aaKnown RBP8.94□□□□□ -0.98
SKA1-201ENST00000285116 TLE4Q04727 773 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 SLC10A1Q14973 349 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 DPPA3Q6W0C5 159 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 CDH20Q9HBT6 801 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 EML6Q6ZMW3 1958 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 IGHV1-45A0A0A0MS14 117 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 FAM24AA6NFZ4 105 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 ZNF732B4DXR9 585 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 CYTIPO60759 359 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 GCGP01275 180 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 AMBPP02760 352 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 OPN1LWP04000 364 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 OPN1MWP04001 364 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 WNT2P09544 360 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 OPN1MW2P0DN77 364 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 OPN1MW3P0DN78 364 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 CEACAM1P13688 526 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 RAB4AP20338 218 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 CD200P41217 278 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 TNFRSF9Q07011 255 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 HNF4GQ14541 408 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 NRN1LQ496H8 165 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 RIPPLY2Q5TAB7 128 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 C5orf24Q7Z6I8 188 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 TMEM105Q8N8V8 129 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 SPIN2AQ99865 258 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 SPIN2BQ9BPZ2 258 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 PLEKHF2Q9H8W4 249 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 ELL3Q9HB65 397 aaPredicted RBP8.94□□□□□ -0.98
SKA1-201ENST00000285116 TMEM38BQ9NVV0 291 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 NBEAQ8NFP9 2946 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 ANKRD11Q6UB99 2663 aaPredicted RBP8.93□□□□□ -0.98
SKA1-201ENST00000285116 PIGBOS1A0A0B4J2F0 54 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 A0A1B0GU03 582 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 hCG_38984A0A1B0GV85 526 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 TRDCB7Z8K6 153 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 DFFBO76075 338 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 DBHP09172 617 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 FUT3P21217 361 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 RBM11P57052 281 aaKnown RBP8.93□□□□□ -0.98
SKA1-201ENST00000285116 SAXO1Q8IYX7 474 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 TMEM222Q9H0R3 208 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 OR14J1Q9UGF5 321 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 RFNGQ9Y644 331 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 MYO7BQ6PIF6 2116 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 ZFYVE26Q68DK2 2539 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 IGKV1-12A0A0C4DH73 117 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 LOC102723971A0A1B0GUV8 181 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 A0A1W2PQM1 296 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 IGSF23A1L1A6 192 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 NRASP01111 189 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 IGKV1D-12P01611 117 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 RAC3P60763 192 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 BAXQ07812 192 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 TSPO2Q5TGU0 170 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 SPEM1Q8N4L4 309 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 KCNE4Q8WWG9 221 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 IL22RA2Q969J5 263 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 BORCS8Q96FH0 119 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 CABLES2Q9BTV7 478 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 RBM24Q9BX46 236 aaKnown RBP8.93□□□□□ -0.98
SKA1-201ENST00000285116 SLC7A11Q9UPY5 501 aa8.93□□□□□ -0.98
SKA1-201ENST00000285116 GEMIN2O14893 280 aaKnown RBP8.92□□□□□ -0.98
SKA1-201ENST00000285116 TCN2P20062 427 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 MALLQ13021 153 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 IL11RAQ14626 422 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 DAZAP2Q15038 168 aaPredicted RBP8.92□□□□□ -0.98
SKA1-201ENST00000285116 COA6Q5JTJ3 125 aaKnown RBP8.92□□□□□ -0.98
SKA1-201ENST00000285116 ABLIM2Q6H8Q1 611 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 OR10A7Q8NGE5 316 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 OR1P1Q8NH06 330 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 OR4X1Q8NH49 305 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 CTDSP1Q9GZU7 261 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 EREGO14944 169 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 MPPED1O15442 326 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 CBR3O75828 277 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 EPHA8P29322 1005 aaPredicted RBP8.92□□□□□ -0.98
SKA1-201ENST00000285116 RRADP55042 308 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 B3GALT5-AS1P59052 145 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 PCBD1P61457 104 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 RNPS1Q15287 305 aaKnown RBP8.92□□□□□ -0.98
SKA1-201ENST00000285116 PHLDA2Q53GA4 152 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 CMTM1Q8IZ96 169 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 OR5L1Q8NGL2 311 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 TMEM171Q8WVE6 324 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 CCDC74BQ96LY2 380 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 SRD5A3Q9H8P0 318 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 LYRM2Q9NU23 88 aaPredicted RBP8.92□□□□□ -0.98
SKA1-201ENST00000285116 MRPS18CQ9Y3D5 142 aaKnown RBP8.92□□□□□ -0.98
SKA1-201ENST00000285116 ARID1AO14497 2285 aa8.92□□□□□ -0.98
SKA1-201ENST00000285116 TNRC6AQ8NDV7 1962 aaKnown RBP8.91□□□□□ -0.98
SKA1-201ENST00000285116 TRAV1-1A0A0B4J248 108 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 A0A0J9YW62 118 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms