RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TMEM255AQ5JRV8 349 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 DMRTA1Q5VZB9 504 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 NCBP2LA6PVI3 153 aaKnown RBP14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 PAGE4O60829 102 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 HSPB1P04792 205 aaKnown RBP14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 ORM2P19652 201 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 RPS4Y1P22090 263 aaKnown RBP14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 MEOX1P50221 254 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 CADM4Q8NFZ8 388 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 ADAMTS17Q8TE56 1095 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 HSD17B10Q99714 261 aaKnown RBP14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 ZPBPQ9BS86 351 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 M0R2Z0 102 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 NEURL1O76050 574 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 ACTL6AO96019 429 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 UBE2L3P68036 154 aaKnown RBP14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 ALPK2Q86TB3 2170 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 ABHD14AQ9BUJ0 271 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 OR5AC2Q9NZP5 309 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 UQCR10Q9UDW1 63 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 EIF4EBP2Q13542 120 aaPredicted RBP14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 ZNF766Q5HY98 468 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 RHBDD2Q6NTF9 364 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 SLC36A1Q7Z2H8 476 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 OR1K1Q8NGR3 316 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 LRRC3CA6NJW4 275 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 PEBP1P30086 187 aaKnown RBP14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 AQP10Q96PS8 301 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 KIF13BQ9NQT8 1826 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 A6NDN8 102 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 UCN2Q96RP3 112 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 MPC1Q9Y5U8 109 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 SPTA1P02549 2419 aa14.42□□□□□ -0.1
SH3RF1-201ENST00000284637 SVILO95425 2214 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 MOSPD3O75425 235 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 CDS2O95674 445 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 OR4F17Q8NGA8 305 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 R3HDM4Q96D70 268 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 GABRG3Q99928 467 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 IGHV1OR15-9A0A0B4J2B8 117 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 TRGV8A0A0C4DH27 118 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 SPINT1O43278 529 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 IGKV1D-16P01601 117 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 HOXA5P20719 270 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 TRAT1Q6PIZ9 186 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 OR2I1PQ8NGU4 316 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 OIT3Q8WWZ8 545 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 SLC7A10Q9NS82 523 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 TGIF2-C20orf24A0A0A6YYL0 155 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 A0A1W2PPC1 479 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 K7EQS6 105 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 CDIPTO14735 213 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 SLC26A1Q9H2B4 701 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 SLC2A8Q9NY64 477 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 TNFSF14O43557 240 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 RAB7AP51149 207 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 HIST3H3Q16695 136 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 C16orf82Q7Z2V1 217 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 OR4P4Q8NGL7 312 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 HSPB9Q9BQS6 159 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 LPAR5Q9H1C0 372 aa14.41□□□□□ -0.1
SH3RF1-201ENST00000284637 POU2F2P09086 479 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 LIMS1P48059 325 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 SUCLG1P53597 346 aaKnown RBP14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 PRSS53Q2L4Q9 553 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 Q56UQ5 140 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 SPINK14Q6IE38 97 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 MRPL54Q6P161 138 aaKnown RBP14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 HOGA1Q86XE5 327 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 SFTPA2Q8IWL1 248 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 H1FOOQ8IZA3 346 aaPredicted RBP14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 SLC25A38Q96DW6 304 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 ATG101Q9BSB4 218 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 NPTNQ9Y639 398 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 NXPH1P58417 271 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 PSG5Q15238 335 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 TMEM251Q8N6I4 163 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 OR2M7Q8NG81 312 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 C1QL1O75973 258 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 SCGB1C2P0DMR2 95 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 HOXA6P31267 233 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 RUNX1Q01196 453 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 BCL2P10415 239 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 PMELP40967 661 aa14.4□□□□□ -0.1
SH3RF1-201ENST00000284637 A0A1W2PP11 408 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 CD8AP01732 235 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 HIST1H1BP16401 226 aaKnown RBP14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 G6PCP35575 357 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 HINT1P49773 126 aaPredicted RBP14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 TMEM50BP56557 158 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 GGTLC2Q14390 218 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 CCL17Q92583 94 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 SIPA1L3O60292 1781 aaPredicted RBP14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 UBE2CO00762 179 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 RAB29O14966 203 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 SP1P08047 785 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 OR2D3Q8NGH3 330 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 MRPL30Q8TCC3 161 aaKnown RBP14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 PTX4Q96A99 478 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 SMIM17P0DL12 118 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms