RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 RGS13O14921 159 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 UBE2L6O14933 153 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 LINC01565O15544 149 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 GFRA3O60609 400 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF737O75373 536 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 LIFP15018 202 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CTF1Q16619 201 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 PLCH1Q4KWH8 1693 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 WDR38Q5JTN6 314 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 SPANXN1Q5VSR9 72 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 PMS2CLQ68D20 193 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 BPIFA4PQ86YQ2 179 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TMEM183AQ8IXX5 376 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 MRAP2Q96G30 205 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 PACRGQ96M98 296 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 MMP26Q9NRE1 261 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 C20orf141Q9NUB4 165 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TINAGQ9UJW2 476 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 HSPB8Q9UJY1 196 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ING1Q9UK53 422 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 PCOLCE2Q9UKZ9 415 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TOGARAM1Q9Y4F4 1720 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 PLPP3O14495 311 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CXorf1O96002 111 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 GAPDHP04406 335 aaKnown RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 MAS1LP35410 378 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 MMP16P51512 607 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 NUBP1P53384 320 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 MLF1P58340 268 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 GUK1Q16774 197 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CXorf66Q5JRM2 361 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 C11orf87Q6NUJ2 197 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TEPPQ6URK8 271 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF383Q8NA42 475 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ZBTB44Q8NCP5 570 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 OR4C5Q8NGB2 326 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 OR2T10Q8NGZ9 312 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF519Q8TB69 540 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 WNT2BQ93097 391 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ZG16BQ96DA0 208 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TIMP4Q99727 224 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ABHD14AQ9BUJ0 271 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 JMJD1CQ15652 2540 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 A0A1W2PR80 420 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ICMTO60725 284 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CTAG2O75638 210 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 SFT2D2O95562 160 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 HPRT1P00492 218 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 INHBBP09529 407 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CD99P14209 185 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 P2RY1P47900 373 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 B2MP61769 119 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 FABP5Q01469 135 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 C12orf73Q69YU5 71 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 VN1R4Q7Z5H5 301 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 RELL2Q8NC24 303 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ABHD3Q8WU67 409 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 RNF133Q8WVZ7 376 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 EID2BQ96D98 161 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 WDR89Q96FK6 387 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 RBM14Q96PK6 669 aaKnown RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 OR2V2Q96R30 315 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 C2CD3Q4AC94 2353 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 WNK3Q9BYP7 1800 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TJP1Q07157 1748 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CDAP32320 146 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 MAGEA5P43359 124 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CELF2-AS1Q8N7Q2 184 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 MZB1Q8WU39 189 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 WDFY2Q96P53 400 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 SRD5A3Q9H8P0 318 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 GPR35Q9HC97 309 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CLEC5AQ9NY25 188 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CTXND1A0A1B0GTU2 59 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 FOXH1O75593 365 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 RHBDL1O75783 438 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 DAOP14920 347 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 HOXA6P31267 233 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 RPS27P42677 84 aaKnown RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ZXDAP98168 799 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 RNFT1Q5M7Z0 435 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF680Q8NEM1 530 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 OR10G8Q8NGN5 311 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ABHD14BQ96IU4 210 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 SMDT1Q9H4I9 107 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ASCL3Q9NQ33 180 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 KCNE3Q9Y6H6 103 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 SPAARA0A1B0GVQ0 90 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 M0QZK8 103 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CDIPTO14735 213 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 AKR7A2O43488 359 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ALX3O95076 343 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 CD81P60033 236 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 HLA-DRB3P79483 266 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 B4GALNT1Q00973 533 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 GBGT1Q8N5D6 347 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF418Q8TF45 676 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-201ENST00000283254 VSTM2LQ96N03 204 aa3.58□□□□□ -1.84
SCN3A-201ENST00000283254 LRRC3BQ96PB8 259 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms