RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 BHLHA15Q7RTS1 189 aaPredicted RBP7.73□□□□□ -1.17
NIPBL-201ENST00000282516 MRGPRX1Q96LB2 322 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 TMEM70Q9BUB7 260 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 MMP25Q9NPA2 562 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 RREB1Q92766 1687 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 PITX3O75364 302 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 HLA-DQA1P01909 254 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 SMAD4Q13485 552 aaKnown RBP7.73□□□□□ -1.17
NIPBL-201ENST00000282516 SYT11Q9BT88 431 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 ZNF646O15015 1829 aaPredicted RBP7.73□□□□□ -1.17
NIPBL-201ENST00000282516 IGHV3-43A0A0B4J1X8 118 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 KBTBD11O94819 623 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 IGHV3-43DP0DP04 118 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 IL11RAQ14626 422 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 UBE2V2Q15819 145 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 OR4D9Q8NGE8 314 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 AQP10Q96PS8 301 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 MPDU1O75352 247 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 HOXC4P09017 264 aaPredicted RBP7.73□□□□□ -1.17
NIPBL-201ENST00000282516 ZNF137PP52743 207 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 FMODQ06828 376 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 ALKAL1Q6UXT8 129 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 WNK1Q9H4A3 2382 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 A0A0A6YYD5 115 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 LNP1A1A4G5 178 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 PLAURQ03405 335 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 LRRC75BQ2VPJ9 315 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 WDR38Q5JTN6 314 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 TMEM78Q5T7P6 136 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 KIRREL2Q6UWL6 708 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 CLEC18BQ6UXF7 455 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 ZNF665Q9H7R5 613 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 ZNF275Q9NSD4 429 aaPredicted RBP7.73□□□□□ -1.17
NIPBL-201ENST00000282516 PGPEP1Q9NXJ5 209 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 MPC1Q9Y5U8 109 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 MED19A0JLT2 244 aaPredicted RBP7.73□□□□□ -1.17
NIPBL-201ENST00000282516 TMPRSS2O15393 492 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 ERVFRD-1P60508 538 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 NSUN5P2Q63ZY6 315 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 WDR25Q64LD2 544 aaPredicted RBP7.73□□□□□ -1.17
NIPBL-201ENST00000282516 C17orf99Q6UX52 265 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 RIMKLAQ8IXN7 391 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 ZNF441Q8N8Z8 693 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 ASB5Q8WWX0 329 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 DPH3Q96FX2 82 aa7.73□□□□□ -1.17
NIPBL-201ENST00000282516 BTAF1O14981 1849 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 LINC01553A4QN01 128 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 H0Y8X5 98 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 RPS20P60866 119 aaKnown RBP7.72□□□□□ -1.17
NIPBL-201ENST00000282516 SKP2Q13309 424 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 DNAJC25-GNG10A0A024R161 153 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 LMO7DNF2Z398 122 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 ARL6IP6Q8N6S5 226 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 GEMIN7Q9H840 131 aaKnown RBP7.72□□□□□ -1.17
NIPBL-201ENST00000282516 HEXA-AS1Q9H8Q6 139 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 SLC25A37Q9NYZ2 338 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 PHLDA3Q9Y5J5 127 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 MFAP2P55001 183 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 EIF3IQ13347 325 aaKnown RBP7.72□□□□□ -1.17
NIPBL-201ENST00000282516 DNAJB12Q9NXW2 375 aaKnown RBP7.72□□□□□ -1.17
NIPBL-201ENST00000282516 SOCS7O14512 581 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 GLULP15104 373 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 NCMAPQ5T1S8 102 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 PAXXQ9BUH6 204 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 H3BQ15 152 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 EPPINO95925 133 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 PMCHL2Q9BQD1 86 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 SMDT1Q9H4I9 107 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 WNT9BO14905 357 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 CACNG7P62955 275 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 PMCHL1Q16048 86 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 GCSAMLQ5JQS6 135 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 HARBI1Q96MB7 349 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 A0A0B4J293 547 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 TCRBV5S2A0A599 114 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 HYPMO75409 117 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 ABLIM3O94929 683 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 IL4P05112 153 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 LSM10Q969L4 123 aaKnown RBP7.72□□□□□ -1.17
NIPBL-201ENST00000282516 C4orf45Q96LM5 186 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 TRAF4Q9BUZ4 470 aaPredicted RBP7.72□□□□□ -1.17
NIPBL-201ENST00000282516 B4E171 279 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 BCL2P10415 239 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 OR4C13Q8NGP0 309 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 TMEM174Q8WUU8 243 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 GALNT14Q96FL9 552 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 TNFRSF19Q9NS68 423 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 RGPD4Q7Z3J3 1758 aa7.72□□□□□ -1.17
NIPBL-201ENST00000282516 S1PR2O95136 353 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 VDAC1P21796 283 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 VEGFBP49765 207 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 SMUG1Q53HV7 270 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 DEGS2Q6QHC5 323 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 TEPPQ6URK8 271 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 MAP1LC3AQ9H492 121 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 OR51B2Q9Y5P1 312 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 ZFPL1O95159 310 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 C10orf128Q5T292 105 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 RND1Q92730 232 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms