RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 RP2O75695 350 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 HAND1O96004 215 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 S100A1P23297 94 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 ZNF497Q6ZNH5 498 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 THAP6Q8TBB0 222 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 OR14J1Q9UGF5 321 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 DUSP13Q9UII6 198 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 ZSCAN5BA6NJL1 495 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 SH2D1BO14796 132 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 TK1P04183 234 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 ZNF250P15622 560 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 GLRXP35754 106 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 KCNJ3P48549 501 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 CYCSP99999 105 aaKnown RBP17.64■□□□□ 0.41
YBX3-202ENST00000279550 BEX5Q5H9J7 111 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 SPIN3Q5JUX0 258 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 SPERTQ8NA61 448 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 GALNT14Q96FL9 552 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 VRK1Q99986 396 aaPredicted RBP17.64■□□□□ 0.41
YBX3-202ENST00000279550 MAB21L2Q9Y586 359 aa17.64■□□□□ 0.41
YBX3-202ENST00000279550 HEATR1Q9H583 2144 aaKnown RBP17.63■□□□□ 0.41
YBX3-202ENST00000279550 TUBAL3A6NHL2 446 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 DIRAS3O95661 229 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 GNRHRP30968 328 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 MDH2P40926 338 aaKnown RBP17.63■□□□□ 0.41
YBX3-202ENST00000279550 SHEQ5VZ18 495 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 GGNBP1Q5YKI7 109 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 VHLLQ6RSH7 139 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 ACP7Q6ZNF0 438 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 LDLRAD3Q86YD5 345 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 GAPTQ8N292 157 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 OR2Z1Q8NG97 314 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 SECTM1Q8WVN6 248 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 SYT3Q9BQG1 590 aa17.63■□□□□ 0.41
YBX3-202ENST00000279550 TRBV6-7A0A0A0MS04 114 aa17.62■□□□□ 0.41
YBX3-202ENST00000279550 A0A0D9SG52 128 aa17.62■□□□□ 0.41
YBX3-202ENST00000279550 RPS23P62266 143 aaKnown RBP17.62■□□□□ 0.41
YBX3-202ENST00000279550 SPRNQ5BIV9 151 aa17.62■□□□□ 0.41
YBX3-202ENST00000279550 NUP37Q8NFH4 326 aa17.62■□□□□ 0.41
YBX3-202ENST00000279550 OR4A4PQ8NGN8 299 aa17.62■□□□□ 0.41
YBX3-202ENST00000279550 TMEM171Q8WVE6 324 aa17.62■□□□□ 0.41
YBX3-202ENST00000279550 CABLES2Q9BTV7 478 aa17.62■□□□□ 0.41
YBX3-202ENST00000279550 ESRP2Q9H6T0 727 aaKnown RBP17.62■□□□□ 0.41
YBX3-202ENST00000279550 OR5AC2Q9NZP5 309 aa17.62■□□□□ 0.41
YBX3-202ENST00000279550 KCNIP3Q9Y2W7 256 aa17.62■□□□□ 0.41
YBX3-202ENST00000279550 PSPNO60542 156 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 OR2F2O95006 317 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 IGHV3-13P01766 116 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 CTXN2P0C2S0 81 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 OR2F1Q13607 317 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 ZNF345Q14585 488 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 ACOT7LQ6ZUV0 252 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 GLYATL2Q8WU03 294 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 RRNAD1Q96FB5 475 aaKnown RBP17.61■□□□□ 0.41
YBX3-202ENST00000279550 TP53RKQ96S44 253 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 SUCNR1Q9BXA5 334 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 SLC5A7Q9GZV3 580 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 TREM2Q9NZC2 230 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 GSKIPQ9P0R6 139 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 ANKRD34BA5PLL1 514 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 B3GALNT1O75752 331 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 PTBP3O95758 552 aaKnown RBP17.61■□□□□ 0.41
YBX3-202ENST00000279550 RAB32Q13637 225 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 IAH1Q2TAA2 248 aaPredicted RBP17.61■□□□□ 0.41
YBX3-202ENST00000279550 NCMAPQ5T1S8 102 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 LIAT1Q6ZQX7 453 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 ZNF818PQ6ZRF7 136 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 CCDC71LQ8N9Z2 235 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 LHFPL5Q8TAF8 219 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 UBALD1Q8TB05 177 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 DCUN1D4Q92564 292 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 MSI2Q96DH6 328 aaKnown RBP17.61■□□□□ 0.41
YBX3-202ENST00000279550 KIRREL1Q96J84 757 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 GPHA2Q96T91 129 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 OR1A1Q9P1Q5 309 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 METRNQ9UJH8 293 aa17.61■□□□□ 0.41
YBX3-202ENST00000279550 hCG_1807616A0A1W2PRN6 198 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 LINC00862A6NCI5 91 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 MPPED1O15442 326 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 LYL1P12980 280 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 EGR1P18146 543 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 CD200P41217 278 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 KLF3P57682 345 aaPredicted RBP17.6■□□□□ 0.41
YBX3-202ENST00000279550 CLLU1Q5K131 121 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 FIP1L1Q6UN15 594 aaKnown RBP17.6■□□□□ 0.41
YBX3-202ENST00000279550 ALKAL2Q6UX46 152 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 H1FOOQ8IZA3 346 aaPredicted RBP17.6■□□□□ 0.41
YBX3-202ENST00000279550 LRRC29Q8WV35 223 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 PLPPR2Q96GM1 343 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 C18orf12Q96KH6 178 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 CCL28Q9NRJ3 127 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 CADP27708 2225 aa17.6■□□□□ 0.41
YBX3-202ENST00000279550 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.59■□□□□ 0.41
YBX3-202ENST00000279550 PHF1O43189 567 aaPredicted RBP17.59■□□□□ 0.41
YBX3-202ENST00000279550 BCL2L11O43521 198 aa17.59■□□□□ 0.41
YBX3-202ENST00000279550 C6orf183Q5T699 404 aa17.59■□□□□ 0.41
YBX3-202ENST00000279550 ADAM5Q6NVV9 412 aa17.59■□□□□ 0.41
YBX3-202ENST00000279550 PRSS54Q6PEW0 395 aa17.59■□□□□ 0.41
YBX3-202ENST00000279550 MOB1BQ7L9L4 216 aa17.59■□□□□ 0.41
YBX3-202ENST00000279550 LYZL2Q7Z4W2 148 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms