RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 FBXO9Q9UK97 447 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-201ENST00000276573 APC2O95996 2303 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 hCG_1807616A0A1W2PRN6 198 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 ZSCAN5BA6NJL1 495 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 ATP6V1G2-DDX39BF2Z307 99 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 IFNL4K9M1U5 179 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 HSD17B6O14756 317 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 PET100P0DJ07 73 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 CCKARP32238 428 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 CFHR2P36980 270 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 NUP62P37198 522 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-201ENST00000276573 RPS23P62266 143 aaKnown RBP8.07□□□□□ -1.12
TRIM55-201ENST00000276573 HOXA4Q00056 320 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-201ENST00000276573 RBPJQ06330 500 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 ESCO2Q56NI9 601 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 VHLLQ6RSH7 139 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 RELL2Q8NC24 303 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-201ENST00000276573 OR10Z1Q8NGY1 313 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 LRRC29Q8WV35 223 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 IL1F10Q8WWZ1 152 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 TMEM56Q96MV1 263 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 TMEM222Q9H0R3 208 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 OR1A1Q9P1Q5 309 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 UBE2J1Q9Y385 318 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-201ENST00000276573 TMEM56-RWDD3S4R434 201 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 MGAQ8IWI9 3026 aa8.07□□□□□ -1.12
TRIM55-201ENST00000276573 TMEM30CPA0ZSE6 113 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 F5H0A9 414 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-201ENST00000276573 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-201ENST00000276573 PGLYRP1O75594 196 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-201ENST00000276573 RLN2P04090 185 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 HEXAP06865 529 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 S100A10P60903 97 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 HMGN3Q15651 99 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 SMIM21Q3B7S5 101 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 CMTM1Q8IZ96 169 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 OR10V1Q8NGI7 309 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 MEGF10Q96KG7 1140 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 AQP10Q96PS8 301 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 ZNF471Q9BX82 626 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-201ENST00000276573 SEBOXQ9HB31 216 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-201ENST00000276573 TAF9BQ9HBM6 251 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 TMED3Q9Y3Q3 217 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 MSGN1A6NI15 193 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 DLL1O00548 723 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 CDS2O95674 445 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 TFF1P04155 84 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 NMBP08949 121 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 PRDX2P32119 198 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 OR3A1P47881 315 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 LUMP51884 338 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-201ENST00000276573 SELENOVP59797 346 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 SRPXP78539 464 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 COL10A1Q03692 680 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 AESQ08117 197 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 SPRNQ5BIV9 151 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 TMEM268Q5VZI3 342 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 MEX3BQ6ZN04 569 aaKnown RBP8.06□□□□□ -1.12
TRIM55-201ENST00000276573 FAM219AQ8IW50 185 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 FOXRED2Q8IWF2 684 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 SELENOHQ8IZQ5 122 aaKnown RBP8.06□□□□□ -1.12
TRIM55-201ENST00000276573 BVESQ8NE79 360 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 OR2V2Q96R30 315 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 GPHA2Q96T91 129 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 MRPL37Q9BZE1 423 aaKnown RBP8.06□□□□□ -1.12
TRIM55-201ENST00000276573 KCNIP1Q9NZI2 227 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 METRNQ9UJH8 293 aa8.06□□□□□ -1.12
TRIM55-201ENST00000276573 DPRXA6NFQ7 191 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 SRRM5B3KS81 715 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 HSPA12AO43301 675 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 SPRY3O43610 288 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 DEDDO75618 318 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 MBPP02686 304 aaPredicted RBP8.05□□□□□ -1.12
TRIM55-201ENST00000276573 THBDP07204 575 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 RRASP10301 218 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 PSG2P11465 335 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 EGR1P18146 543 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 PTAFRP25105 342 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 UCP1P25874 307 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 S100GP29377 79 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 CEACAM6P40199 344 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 SMCO1Q147U7 214 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 TESK1Q15569 626 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 TMEM108Q6UXF1 575 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 COMMD7Q86VX2 200 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 FAM90A1Q86YD7 464 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 ZNF695Q8IW36 515 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 PRR18Q8N4B5 295 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 CD177Q8N6Q3 437 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 SLC35G3Q8N808 338 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 NUP37Q8NFH4 326 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 LILRB1Q8NHL6 650 aaPredicted RBP8.05□□□□□ -1.12
TRIM55-201ENST00000276573 UBALD1Q8TB05 177 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 PHYHIPLQ96FC7 376 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 COQ2Q96H96 371 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 DMRTA2Q96SC8 542 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 SHARPINQ9H0F6 387 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 CYTL1Q9NRR1 136 aa8.05□□□□□ -1.12
TRIM55-201ENST00000276573 LSM5Q9Y4Y9 91 aaKnown RBP8.05□□□□□ -1.12
TRIM55-201ENST00000276573 ANKRD11Q6UB99 2663 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms