RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 TMEM241Q24JQ0 296 aa11.09□□□□□ -0.63
HERC6-202ENST00000273960 R3HDM4Q96D70 268 aa11.09□□□□□ -0.63
HERC6-202ENST00000273960 RBM24Q9BX46 236 aaKnown RBP11.09□□□□□ -0.63
HERC6-202ENST00000273960 OR2J1Q9GZK6 312 aa11.09□□□□□ -0.63
HERC6-202ENST00000273960 UBE2ZQ9H832 354 aaPredicted RBP11.09□□□□□ -0.63
HERC6-202ENST00000273960 ZNF737O75373 536 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 PDGFBP01127 241 aaPredicted RBP11.08□□□□□ -0.64
HERC6-202ENST00000273960 UBE2G2P60604 165 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 FOXF1Q12946 379 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 TBC1D26Q86UD7 250 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 ARL6IP6Q8N6S5 226 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 CPEB3Q8NE35 698 aaKnown RBP11.08□□□□□ -0.64
HERC6-202ENST00000273960 EXTL1Q92935 676 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 KCNK17Q96T54 332 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 ATP5SQ99766 215 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 Q9N2K0 584 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 CFIP05156 583 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 CDKN1AP38936 164 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 SLC6A8P48029 635 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 RAB7AP51149 207 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 DAP3P51398 398 aaKnown RBP11.08□□□□□ -0.64
HERC6-202ENST00000273960 D2HGDHQ8N465 521 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 OR1L6Q8NGR2 347 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 OR51I2Q9H344 312 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 ASCL3Q9NQ33 180 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 SERINC1Q9NRX5 453 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 TRAPPC1Q9Y5R8 145 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 DOCK7Q96N67 2140 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 TRBV24-1A0A075B6N3 115 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 PITX3O75364 302 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 PATE4P0C8F1 98 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 KRTDAPP60985 99 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 MYBPHQ13203 477 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 ARL6IP1Q15041 203 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 ATOH7Q8N100 152 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 OR2T10Q8NGZ9 312 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 GNPNAT1Q96EK6 184 aaPredicted RBP11.08□□□□□ -0.64
HERC6-202ENST00000273960 C18orf12Q96KH6 178 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 SLC39A9Q9NUM3 307 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 HS3ST3A1Q9Y663 406 aa11.08□□□□□ -0.64
HERC6-202ENST00000273960 RALGAPA1Q6GYQ0 2036 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 MAP1LC3B2A6NCE7 125 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 ANKUB1A6NFN9 424 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 PAX1P15863 534 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 CHRNB4P30926 498 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 BRS3P32247 399 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 CNN1P51911 297 aaKnown RBP11.07□□□□□ -0.64
HERC6-202ENST00000273960 C1orf194Q5T5A4 169 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 BTF3L4Q96K17 158 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 MAP1LC3BQ9GZQ8 125 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 MRPS18CQ9Y3D5 142 aaKnown RBP11.07□□□□□ -0.64
HERC6-202ENST00000273960 B4E171 279 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 CLPSP04118 112 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 CEACAM8P31997 349 aaPredicted RBP11.07□□□□□ -0.64
HERC6-202ENST00000273960 TSPAN7P41732 249 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 TGFBR3Q03167 851 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 RAB35Q15286 201 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 ZNF726P1Q15940 193 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 VHLLQ6RSH7 139 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 GRINAQ7Z429 371 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 RCC1LQ96I51 464 aaKnown RBP11.07□□□□□ -0.64
HERC6-202ENST00000273960 LYZL4Q96KX0 146 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 HSPB9Q9BQS6 159 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 VAX2Q9UIW0 290 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 IGHV3-15A0A0B4J1V0 119 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 TP53I11O14683 189 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 MPPED1O15442 326 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 GUCA1AP43080 201 aaPredicted RBP11.07□□□□□ -0.64
HERC6-202ENST00000273960 SPANXN5Q5MJ07 72 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 GAPTQ8N292 157 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 NOXO1Q8NFA2 376 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 OR4D5Q8NGN0 318 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
HERC6-202ENST00000273960 PHF7Q9BWX1 381 aaPredicted RBP11.07□□□□□ -0.64
HERC6-202ENST00000273960 SAMD10Q9BYL1 202 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 SLC7A10Q9NS82 523 aa11.07□□□□□ -0.64
HERC6-202ENST00000273960 PRRC2CQ9Y520 2896 aaKnown RBP11.06□□□□□ -0.64
HERC6-202ENST00000273960 IGHV1OR15-9A0A0B4J2B8 117 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 A6NCN8 305 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 B4DEV8 164 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 PFN1P07737 140 aaKnown RBP11.06□□□□□ -0.64
HERC6-202ENST00000273960 CEACAM6P40199 344 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 RND2P52198 227 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 SLC25A26Q70HW3 274 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 SYT13Q7L8C5 426 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 C9orf40Q8IXQ3 194 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 OR51G1Q8NGK1 321 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 C1QTNF9BB2RNN3 333 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 TAS2R30P59541 319 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 RPL23P62829 140 aaKnown RBP11.06□□□□□ -0.64
HERC6-202ENST00000273960 HLA-BQ31612 363 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 DOK3Q7L591 496 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 LYRM2Q9NU23 88 aaPredicted RBP11.06□□□□□ -0.64
HERC6-202ENST00000273960 MRPS17Q9Y2R5 130 aaKnown RBP11.06□□□□□ -0.64
HERC6-202ENST00000273960 PI4KAP42356 2102 aa11.06□□□□□ -0.64
HERC6-202ENST00000273960 TRAV39A0A0B4J263 110 aa11.05□□□□□ -0.64
HERC6-202ENST00000273960 UBE2L5PA0A1B0GUS4 154 aa11.05□□□□□ -0.64
HERC6-202ENST00000273960 C20orf202A1L168 122 aa11.05□□□□□ -0.64
HERC6-202ENST00000273960 SRFP11831 508 aa11.05□□□□□ -0.64
HERC6-202ENST00000273960 OR10J1P30954 320 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms