RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 TM4SF18Q96CE8 201 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 ARHGAP5-AS1Q96IT6 56 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 OR2C3Q8N628 320 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 PRR7Q8TB68 274 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 PRRX2Q99811 253 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 POMT2Q9UKY4 750 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 SLIT2O94813 1529 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 ICOSLGO75144 302 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 C1SP09871 688 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 HOXD3P31249 432 aaPredicted RBP14.01□□□□□ -0.17
UBR3-201ENST00000272793 LINC00303Q3SY05 128 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 ALKBH3Q96Q83 286 aaPredicted RBP14.01□□□□□ -0.17
UBR3-201ENST00000272793 CDC42EP3Q9UKI2 254 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 ZDHHC8Q9ULC8 765 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 A0A1W2PQM1 296 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 NKX2-8O15522 239 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 FPR2P25090 351 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 EVX1P49640 407 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 RPS4XP62701 263 aaKnown RBP14.01□□□□□ -0.17
UBR3-201ENST00000272793 RPL18Q07020 188 aaKnown RBP14.01□□□□□ -0.17
UBR3-201ENST00000272793 COX19Q49B96 90 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 RFLNAQ6ZTI6 216 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 TNFSF15O95150 251 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 MAVSQ7Z434 540 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 ANKRD37Q7Z713 158 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 C1RLQ9NZP8 487 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 CCL27Q9Y4X3 112 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 CLDN15P56746 228 aa14□□□□□ -0.17
UBR3-201ENST00000272793 CYSLTR1Q9Y271 337 aa14□□□□□ -0.17
UBR3-201ENST00000272793 H3BMH7 237 aa14□□□□□ -0.17
UBR3-201ENST00000272793 IGKV3-20P01619 116 aa14□□□□□ -0.17
UBR3-201ENST00000272793 PF4V1P10720 104 aa14□□□□□ -0.17
UBR3-201ENST00000272793 FUT3P21217 361 aa14□□□□□ -0.17
UBR3-201ENST00000272793 HIST1H1AQ02539 215 aaPredicted RBP14□□□□□ -0.17
UBR3-201ENST00000272793 C1orf220Q5T0J3 134 aa14□□□□□ -0.17
UBR3-201ENST00000272793 YIPF6Q96EC8 236 aa14□□□□□ -0.17
UBR3-201ENST00000272793 IL19Q9UHD0 177 aa14□□□□□ -0.17
UBR3-201ENST00000272793 ATF1P18846 271 aa14□□□□□ -0.17
UBR3-201ENST00000272793 SUMO3P55854 103 aaPredicted RBP14□□□□□ -0.17
UBR3-201ENST00000272793 ARIH2OSQ8N7S6 290 aa14□□□□□ -0.17
UBR3-201ENST00000272793 ST6GALNAC3Q8NDV1 305 aa14□□□□□ -0.17
UBR3-201ENST00000272793 GPR82Q96P67 336 aa14□□□□□ -0.17
UBR3-201ENST00000272793 OR8B2Q96RD0 313 aa14□□□□□ -0.17
UBR3-201ENST00000272793 KIR2DL4Q99706 377 aa14□□□□□ -0.17
UBR3-201ENST00000272793 GREB1Q4ZG55 1949 aa14□□□□□ -0.17
UBR3-201ENST00000272793 ZNF205O95201 554 aa14□□□□□ -0.17
UBR3-201ENST00000272793 SNAI1O95863 264 aaPredicted RBP14□□□□□ -0.17
UBR3-201ENST00000272793 RIPPLY3P57055 190 aa14□□□□□ -0.17
UBR3-201ENST00000272793 BCORP1Q8N888 145 aa14□□□□□ -0.17
UBR3-201ENST00000272793 OR2Y1Q8NGV0 311 aa14□□□□□ -0.17
UBR3-201ENST00000272793 MED29Q9NX70 200 aa14□□□□□ -0.17
UBR3-201ENST00000272793 MROH2AA6NES4 1674 aa14□□□□□ -0.17
UBR3-201ENST00000272793 TRAV8-6A0A0B4J262 113 aa14□□□□□ -0.17
UBR3-201ENST00000272793 HBBP68871 147 aa14□□□□□ -0.17
UBR3-201ENST00000272793 SELENBP1Q13228 472 aa14□□□□□ -0.17
UBR3-201ENST00000272793 SLC25A35Q3KQZ1 300 aa14□□□□□ -0.17
UBR3-201ENST00000272793 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14□□□□□ -0.173e-8■■■■■ 36.1
UBR3-201ENST00000272793 NUBPLQ8TB37 319 aa14□□□□□ -0.17
UBR3-201ENST00000272793 FAM208AQ9UK61 1670 aaKnown RBP14□□□□□ -0.17
UBR3-201ENST00000272793 FOLR2P14207 255 aa14□□□□□ -0.17
UBR3-201ENST00000272793 MUC1P15941 1255 aaPredicted RBP14□□□□□ -0.17
UBR3-201ENST00000272793 MVDP53602 400 aa14□□□□□ -0.17
UBR3-201ENST00000272793 UBE2V2Q15819 145 aa14□□□□□ -0.17
UBR3-201ENST00000272793 MRPL52Q86TS9 123 aaKnown RBP14□□□□□ -0.17
UBR3-201ENST00000272793 C8orf44Q96CB5 159 aa14□□□□□ -0.17
UBR3-201ENST00000272793 CFDP00746 253 aaPredicted RBP13.99□□□□□ -0.17
UBR3-201ENST00000272793 GHRHP01286 108 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 PAX2Q02962 417 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 MARVELD3Q96A59 401 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 APOBEC3DQ96AK3 386 aaPredicted RBP13.99□□□□□ -0.17
UBR3-201ENST00000272793 MED13Q9UHV7 2174 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 MEF2BQ02080 365 aaPredicted RBP13.99□□□□□ -0.17
UBR3-201ENST00000272793 SSBP1Q04837 148 aaKnown RBP13.99□□□□□ -0.17
UBR3-201ENST00000272793 HS3ST2Q9Y278 367 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 YPEL5P62699 121 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 ANKRD33Q7Z3H0 272 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 THADAQ6YHU6 1953 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 INHBBP09529 407 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 MDH2P40926 338 aaKnown RBP13.99□□□□□ -0.17
UBR3-201ENST00000272793 PLXNB1O43157 2135 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 MED12LQ86YW9 2145 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 WNT9BO14905 357 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 EIF3IQ13347 325 aaKnown RBP13.99□□□□□ -0.17
UBR3-201ENST00000272793 PMCHL1Q16048 86 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 PRICKLE4Q2TBC4 344 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 LYRM4Q9HD34 91 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 OR1K1Q8NGR3 316 aa13.99□□□□□ -0.17
UBR3-201ENST00000272793 HIST1H1DP16402 221 aaKnown RBP13.98□□□□□ -0.17
UBR3-201ENST00000272793 TM4SF1P30408 202 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 SSPNQ14714 243 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 CTF1Q16619 201 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 TMEM108Q6UXF1 575 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 PAXXQ9BUH6 204 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 SLC25A2Q9BXI2 301 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 PTPRDP23468 1912 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 UPK1AO00322 258 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 MAJINQ3KP22 176 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 SLC25A34Q6PIV7 304 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 PEF1Q9UBV8 284 aaKnown RBP13.98□□□□□ -0.17
UBR3-201ENST00000272793 TCRBV16S1A1N1A0A5B0 115 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms