RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 TSPAN32Q96QS1 320 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 COL24A1Q17RW2 1714 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 KBTBD11O94819 623 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 ATG4DQ86TL0 474 aaPredicted RBP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 TMEM230Q96A57 120 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 NDUFAF3Q9BU61 184 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 CXXC4Q9H2H0 198 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 DOK5Q9P104 306 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 MYOGP15173 224 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 EWSR1Q01844 656 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 SRSF7Q16629 238 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 UNQ9370/PRO34162Q6UXP9 181 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 GATAD1Q8WUU5 269 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 RELTQ969Z4 430 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 ASPDHA6ND91 283 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 IFITM10A6NMD0 228 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 ATP5LO75964 103 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 WISP3O95389 354 aaPredicted RBP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 NGFP01138 241 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 AMY1AP04745 511 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 SCGB1D4Q6XE38 83 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 RBM45Q8IUH3 476 aaKnown RBP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 CREBBPQ92793 2442 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 NPIPB6E9PJ23 425 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 PSMB5P28074 263 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 C1orf61Q13536 156 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 ZNF79Q15937 498 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 SIGLEC5O15389 551 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 PEX11BO96011 259 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 HPXP02790 462 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 ARHGAP5-AS1Q96IT6 56 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 SMIM8Q96KF7 97 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 MOB4Q9Y3A3 225 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 MTCH2Q9Y6C9 303 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 TRAV38-1A0A0B4J264 116 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 LINC00869P0C866 280 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 TRGC1P0CF51 173 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 COL8A1P27658 744 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 EDDM3BP56851 147 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 DEFB110Q30KQ9 67 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 MUC15Q8N387 334 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 SNRNP40Q96DI7 357 aaKnown RBP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 A6NIN4 97 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 SLURP2P0DP57 97 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 KLF3P57682 345 aaPredicted RBP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 OVOL2Q9BRP0 275 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 SH2D7A6NKC9 451 aaPredicted RBP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 IGHMP01871 453 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 SLC25A5P05141 298 aaKnown RBP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 ZNF660Q6AZW8 331 aaPredicted RBP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 SLC26A1Q9H2B4 701 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 TBL2Q9Y4P3 447 aaKnown RBP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 CLDN16Q9Y5I7 305 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 S1PR2O95136 353 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 LSM11P83369 360 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 FAM78BQ5VT40 261 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 COX14Q96I36 57 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 PLPP3O14495 311 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 NPY1RP25929 384 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 AVPR2P30518 371 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 TGFBR1P36897 503 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 MEOX1P50221 254 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 FAM90A1Q86YD7 464 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 CNEP1R1Q8N9A8 125 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 PRELID3AQ96N28 172 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 ING1Q9UK53 422 aaPredicted RBP4.35□□□□□ -1.71
HMCN1-201ENST00000271588 TRAV1-1A0A0B4J248 108 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 RPL36A-HNRNPH2H7BZ11 118 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 TRGC2P03986 189 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 PSG9Q00887 426 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 TTC32Q5I0X7 151 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 PLSCR2Q9NRY7 297 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 IL36GQ9NZH8 169 aa4.35□□□□□ -1.71
HMCN1-201ENST00000271588 PPBPP02775 128 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 SPNP16150 400 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 SPEM1Q8N4L4 309 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 C5orf17Q8NAS9 161 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 SGMS2Q8NHU3 365 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 COL18A1P39060 1754 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 GPX4P36969 197 aaPredicted RBP4.34□□□□□ -1.71
HMCN1-201ENST00000271588 LRRC75BQ2VPJ9 315 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 TMEM215Q68D42 235 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 INO80CQ6PI98 192 aaPredicted RBP4.34□□□□□ -1.71
HMCN1-201ENST00000271588 HHIPQ96QV1 700 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 ISG20L2Q9H9L3 353 aaKnown RBP4.34□□□□□ -1.71
HMCN1-201ENST00000271588 GPR132Q9UNW8 380 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 ZNF835Q9Y2P0 537 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 GPR37O15354 613 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 LTB4R2Q9NPC1 389 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 NDUFB3O43676 98 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 RPS16P62249 146 aaKnown RBP4.34□□□□□ -1.71
HMCN1-201ENST00000271588 ZNF658BQ4V348 819 aaPredicted RBP4.34□□□□□ -1.71
HMCN1-201ENST00000271588 ZNF385BQ569K4 471 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 MARCH3Q86UD3 253 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 D2HGDHQ8N465 521 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 ST20Q9HBF5 79 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 HS3ST1O14792 307 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 PRICKLE3O43900 615 aaPredicted RBP4.34□□□□□ -1.71
HMCN1-201ENST00000271588 ARSAP15289 507 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 SLC35B1P78383 322 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms