RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PHF1O43189 567 aaPredicted RBP14□□□□□ -0.17
CCDC40-201ENST00000269318 ALKAL2Q6UX46 152 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 LYZL2Q7Z4W2 148 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 TBC1D26Q86UD7 250 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 FAM219AQ8IW50 185 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 LGI3Q8N145 548 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 SCARB1Q8WTV0 552 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 PCNPQ8WW12 178 aaKnown RBP14□□□□□ -0.17
CCDC40-201ENST00000269318 CCL28Q9NRJ3 127 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 TRAPPC2LQ9UL33 140 aa14□□□□□ -0.17
CCDC40-201ENST00000269318 hCG_1807616A0A1W2PRN6 198 aa13.99□□□□□ -0.17
CCDC40-201ENST00000269318 UBA52P62987 128 aaKnown RBP13.99□□□□□ -0.17
CCDC40-201ENST00000269318 HMGN3Q15651 99 aa13.99□□□□□ -0.17
CCDC40-201ENST00000269318 SMIM21Q3B7S5 101 aa13.99□□□□□ -0.17
CCDC40-201ENST00000269318 C6orf183Q5T699 404 aa13.99□□□□□ -0.17
CCDC40-201ENST00000269318 VHLLQ6RSH7 139 aa13.99□□□□□ -0.17
CCDC40-201ENST00000269318 ST8SIA2Q92186 375 aa13.99□□□□□ -0.17
CCDC40-201ENST00000269318 OR1A1Q9P1Q5 309 aa13.99□□□□□ -0.17
CCDC40-201ENST00000269318 ZGRF1Q86YA3 2104 aa13.99□□□□□ -0.17
CCDC40-201ENST00000269318 LEUTXA8MZ59 168 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-201ENST00000269318 IFNL4K9M1U5 179 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 SPDEFO95238 335 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 PET100P0DJ07 73 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 CFHR2P36980 270 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 RPS23P62266 143 aaKnown RBP13.98□□□□□ -0.17
CCDC40-201ENST00000269318 LRRC29Q8WV35 223 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 CNTNAP3BQ96NU0 1288 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 CNTNAP3Q9BZ76 1288 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 TMEM222Q9H0R3 208 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 RP1L1Q8IWN7 2480 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-201ENST00000269318 TMEM30CPA0ZSE6 113 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 SRRM5B3KS81 715 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 RLN2P04090 185 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 RAB14P61106 215 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 RBPJQ06330 500 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 SPRNQ5BIV9 151 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 SLC35E4Q6ICL7 350 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 OR10Z1Q8NGY1 313 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 OR1S1Q8NH92 325 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 IL1F10Q8WWZ1 152 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 MRPL37Q9BZE1 423 aaKnown RBP13.98□□□□□ -0.17
CCDC40-201ENST00000269318 KIF25Q9UIL4 384 aa13.98□□□□□ -0.17
CCDC40-201ENST00000269318 MSGN1A6NI15 193 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 HSD17B6O14756 317 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 TFF1P04155 84 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 EGR1P18146 543 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 OR3A1P47881 315 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 SRPXP78539 464 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 TESK1Q15569 626 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 NUP37Q8NFH4 326 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 COQ2Q96H96 371 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 MEGF10Q96KG7 1140 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 TMEM56Q96MV1 263 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 AQP10Q96PS8 301 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 OR2V2Q96R30 315 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 DMRTA2Q96SC8 542 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 TAF9BQ9HBM6 251 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 DNAJB11Q9UBS4 358 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 METRNQ9UJH8 293 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 ERRFI1Q9UJM3 462 aaPredicted RBP13.97□□□□□ -0.17
CCDC40-201ENST00000269318 TMEM56-RWDD3S4R434 201 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 MAP1BP46821 2468 aaKnown RBP13.97□□□□□ -0.17
CCDC40-201ENST00000269318 CADP27708 2225 aa13.97□□□□□ -0.17
CCDC40-201ENST00000269318 HEXAP06865 529 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 THBDP07204 575 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 NMBP08949 121 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 LUMP51884 338 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-201ENST00000269318 S100A10P60903 97 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 TMEM108Q6UXF1 575 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 CD177Q8N6Q3 437 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 SLC35G3Q8N808 338 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 BVESQ8NE79 360 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 CITED4Q96RK1 184 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 GPHA2Q96T91 129 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 ARPC5LQ9BPX5 153 aa13.96□□□□□ -0.17
CCDC40-201ENST00000269318 FBXO9Q9UK97 447 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-201ENST00000269318 PGLYRP1O75594 196 aaPredicted RBP13.96□□□□□ -0.18
CCDC40-201ENST00000269318 DEDDO75618 318 aa13.96□□□□□ -0.18
CCDC40-201ENST00000269318 COL10A1Q03692 680 aa13.96□□□□□ -0.18
CCDC40-201ENST00000269318 MEX3BQ6ZN04 569 aaKnown RBP13.96□□□□□ -0.18
CCDC40-201ENST00000269318 CMTM1Q8IZ96 169 aa13.96□□□□□ -0.18
CCDC40-201ENST00000269318 PRR18Q8N4B5 295 aa13.96□□□□□ -0.18
CCDC40-201ENST00000269318 GCSAMQ8N6F7 178 aa13.96□□□□□ -0.18
CCDC40-201ENST00000269318 SHARPINQ9H0F6 387 aa13.96□□□□□ -0.18
CCDC40-201ENST00000269318 TMED3Q9Y3Q3 217 aa13.96□□□□□ -0.18
CCDC40-201ENST00000269318 SPRY3O43610 288 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 IGLV2-14P01704 120 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 PTAFRP25105 342 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 UCP1P25874 307 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 PAX5Q02548 391 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 AESQ08117 197 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 TMEM268Q5VZI3 342 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 FAM90A1Q86YD7 464 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 OR10V1Q8NGI7 309 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 LILRB1Q8NHL6 650 aaPredicted RBP13.95□□□□□ -0.18
CCDC40-201ENST00000269318 UBALD1Q8TB05 177 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 VKORC1Q9BQB6 163 aa13.95□□□□□ -0.18
CCDC40-201ENST00000269318 ZNF471Q9BX82 626 aaPredicted RBP13.95□□□□□ -0.18
CCDC40-201ENST00000269318 SEBOXQ9HB31 216 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms