RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 TIGITQ495A1 244 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 Q6ZT83 130 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 FAM122BQ7Z309 247 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 MITD1Q8WV92 249 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 NEIL1Q96FI4 390 aaPredicted RBP11.87□□□□□ -0.51
NPC1-201ENST00000269228 SLC2A9Q9NRM0 540 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 ZNF629Q9UEG4 869 aaPredicted RBP11.87□□□□□ -0.51
NPC1-201ENST00000269228 DUSP18Q8NEJ0 188 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 OR4A4PQ8NGN8 299 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 KLF7O75840 302 aaPredicted RBP11.87□□□□□ -0.51
NPC1-201ENST00000269228 CLDN14O95500 239 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 CLEC2AQ6UVW9 174 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 OR13D1Q8NGV5 346 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 TMEM54Q969K7 222 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 UMAD1C9J7I0 102 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 IGHMP01871 453 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 NAT2P11245 290 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 FGF12P61328 243 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 C10orf128Q5T292 105 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 HIST2H3AQ71DI3 136 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 LINC01560Q8TB33 94 aa11.87□□□□□ -0.51
NPC1-201ENST00000269228 SPTAN1Q13813 2472 aaKnown RBP11.86□□□□□ -0.51
NPC1-201ENST00000269228 ISG15P05161 165 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 RD3LP0DJH9 198 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 REG1BP48304 166 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 KDF1Q8NAX2 398 aaPredicted RBP11.86□□□□□ -0.51
NPC1-201ENST00000269228 TVP23CQ96ET8 276 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 BARX1Q9HBU1 254 aaPredicted RBP11.86□□□□□ -0.51
NPC1-201ENST00000269228 MED12Q93074 2177 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 NPIPB13A6NJU9 1138 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 NPIPB4C9JG80 1138 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 MGST3O14880 152 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 CRHP06850 196 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 RAB5CP51148 216 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 FBLIM1Q8WUP2 373 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 PTX4Q96A99 478 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 NTNG2Q96CW9 530 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 BSCL2Q96G97 398 aaPredicted RBP11.86□□□□□ -0.51
NPC1-201ENST00000269228 ZNF785A8K8V0 405 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 FAM27E3Q08E93 113 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 FAHD2BQ6P2I3 314 aaPredicted RBP11.86□□□□□ -0.51
NPC1-201ENST00000269228 C17orf82Q86X59 251 aaPredicted RBP11.86□□□□□ -0.51
NPC1-201ENST00000269228 HOGA1Q86XE5 327 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 FAHD2AQ96GK7 314 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 THYN1Q9P016 225 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 OR1A1Q9P1Q5 309 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 RALGAPA1Q6GYQ0 2036 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 ZNF708P17019 499 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 ZNF79Q15937 498 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 DBX2Q6ZNG2 339 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 LIAT1Q6ZQX7 453 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 NDFIP1Q9BT67 221 aa11.86□□□□□ -0.51
NPC1-201ENST00000269228 H7BYZ3 331 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 CST4P01036 141 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 COX5BP10606 129 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 IL13RA2Q14627 380 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 NSUN5P2Q63ZY6 315 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 ETFRF1Q6IPR1 90 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 FADS6Q8N9I5 356 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 NUDT19A8MXV4 375 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 KLF4O43474 513 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 VDAC1P21796 283 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 KLF9Q13886 244 aaPredicted RBP11.85□□□□□ -0.51
NPC1-201ENST00000269228 SMUG1Q53HV7 270 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 PRDM14Q9GZV8 571 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 LPAR5Q9H1C0 372 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 G6PC2Q9NQR9 355 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 KLK13Q9UKR3 277 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 GAB2Q9UQC2 676 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 PLA2G10O15496 165 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 TOX4O94842 621 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 LY86O95711 162 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 OR2H2O95918 312 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 FCGR3AP08637 254 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 TMEM41BQ5BJD5 291 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 FFAR4Q5NUL3 377 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 ZDHHC8Q9ULC8 765 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 CACNA1BQ00975 2339 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 MDC1Q14676 2089 aaKnown RBP11.85□□□□□ -0.51
NPC1-201ENST00000269228 ADAM11O75078 769 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
NPC1-201ENST00000269228 PRSS54Q6PEW0 395 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 HARBI1Q96MB7 349 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 SMIM7Q9BQ49 75 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 ZNF552Q9H707 407 aaPredicted RBP11.85□□□□□ -0.51
NPC1-201ENST00000269228 C1RLQ9NZP8 487 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 PIPOXQ9P0Z9 390 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 ZNF107Q9UII5 783 aaPredicted RBP11.85□□□□□ -0.51
NPC1-201ENST00000269228 KCNK7Q9Y2U2 307 aa11.85□□□□□ -0.51
NPC1-201ENST00000269228 FAM3AP98173 230 aa11.84□□□□□ -0.51
NPC1-201ENST00000269228 SCGB2A2Q13296 93 aa11.84□□□□□ -0.51
NPC1-201ENST00000269228 MPPED2Q15777 294 aa11.84□□□□□ -0.51
NPC1-201ENST00000269228 OR5M8Q8NGP6 311 aa11.84□□□□□ -0.51
NPC1-201ENST00000269228 MRGPRFQ96AM1 343 aa11.84□□□□□ -0.51
NPC1-201ENST00000269228 FLYWCH2Q96CP2 140 aaKnown RBP11.84□□□□□ -0.51
NPC1-201ENST00000269228 BTF3L4Q96K17 158 aa11.84□□□□□ -0.51
NPC1-201ENST00000269228 LURAP1Q96LR2 239 aa11.84□□□□□ -0.51
NPC1-201ENST00000269228 C12orf57Q99622 126 aa11.84□□□□□ -0.51
NPC1-201ENST00000269228 SMCO4Q9NRQ5 59 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms