RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ABCA4P78363 2273 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 TRAV39A0A0B4J263 110 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 DBX1A6NMT0 343 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 SLC22A5O76082 557 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 CYB5R3P00387 301 aaPredicted RBP13.69□□□□□ -0.22
TPM1-201ENST00000267996 VAMP1P23763 118 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 H2BFSP57053 126 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 RAP2BP61225 183 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 HERV-K104P61576 105 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 AESQ08117 197 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 FAM201AQ5SY85 155 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 CLEC18BQ6UXF7 455 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 TGIF2LYQ8IUE0 185 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 SLC38A6Q8IZM9 456 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 ASCC1Q8N9N2 400 aaKnown RBP13.69□□□□□ -0.22
TPM1-201ENST00000267996 UXS1Q8NBZ7 420 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 SDSLQ96GA7 329 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 PHB2Q99623 299 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 SAP30LQ9HAJ7 183 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 DYNLRB1Q9NP97 96 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 SMG1Q96Q15 3661 aaKnown RBP13.68□□□□□ -0.22
TPM1-201ENST00000267996 CRYM-AS1A6NIL9 109 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 G3V3Q6 166 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 K7N7A8 449 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 IRF2P14316 349 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 MUC1P15941 1255 aaPredicted RBP13.68□□□□□ -0.22
TPM1-201ENST00000267996 ERP29P30040 261 aaKnown RBP13.68□□□□□ -0.22
TPM1-201ENST00000267996 FXYD4P59646 89 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 LY6G6FQ5SQ64 297 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 H1FOOQ8IZA3 346 aaPredicted RBP13.68□□□□□ -0.22
TPM1-201ENST00000267996 PPP1R35Q8TAP8 253 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 ASB13Q8WXK3 278 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 TOMM40LQ969M1 308 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 KIRREL1Q96J84 757 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 CLEC4MQ9H2X3 399 aaPredicted RBP13.68□□□□□ -0.22
TPM1-201ENST00000267996 TAF9BQ9HBM6 251 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 DCAF16Q9NXF7 216 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 MAB21L2Q9Y586 359 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 DSCAMO60469 2012 aa13.68□□□□□ -0.22
TPM1-201ENST00000267996 LRRC30A6NM36 301 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 GOSR2O14653 212 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 MGST3O14880 152 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 GABRA2P47869 451 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 SRSF4Q08170 494 aaKnown RBP13.67□□□□□ -0.22
TPM1-201ENST00000267996 KCNJ8Q15842 424 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 KRBOX4Q5JUW0 171 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 LPCAT3Q6P1A2 487 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 MUC15Q8N387 334 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 OR5M8Q8NGP6 311 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 CASTOR1Q8WTX7 329 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 ZNF486Q96H40 463 aaPredicted RBP13.67□□□□□ -0.22
TPM1-201ENST00000267996 NCOR1P1Q9H4R4 102 aa13.67□□□□□ -0.22
TPM1-201ENST00000267996 RANBP3Q9H6Z4 567 aaPredicted RBP13.67□□□□□ -0.22
TPM1-201ENST00000267996 FAM172BPA6NC97 362 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 OOEPA6NGQ2 149 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 SIX6O95475 246 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 GLIPR1P48060 266 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 PIGPP57054 158 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 CR1LQ2VPA4 569 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 DCAF12L2Q5VW00 463 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 ZNF561Q8N587 486 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 OR10J5Q8NHC4 309 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 WDR89Q96FK6 387 aaPredicted RBP13.66□□□□□ -0.22
TPM1-201ENST00000267996 LURAP1Q96LR2 239 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 HYLS1Q96M11 299 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 CHIAQ9BZP6 476 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 KCNIP1Q9NZI2 227 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 OPN4Q9UHM6 478 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 IGKV1D-13A0A0B4J2D9 117 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 C12orf77C9JDV5 145 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 TMEM178BH3BS89 294 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 LGALS8O00214 317 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 HEXAP06865 529 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 IGKV1-13P0DP09 117 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 GNRHRP30968 328 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 ANKRD55Q3KP44 614 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 KIAA2026Q5HYC2 2103 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 C6orf183Q5T699 404 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 ZNF788Q6ZQV5 615 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 SGPP2Q8IWX5 399 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 OR2T35Q8NGX2 323 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 GALNT14Q96FL9 552 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 BBC3Q96PG8 261 aaPredicted RBP13.66□□□□□ -0.22
TPM1-201ENST00000267996 TOLLIPQ9H0E2 274 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 SLC2A9Q9NRM0 540 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 OR2W1Q9Y3N9 320 aa13.66□□□□□ -0.22
TPM1-201ENST00000267996 TANC2Q9HCD6 1990 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 B8ZZF3 427 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 IGFBP2P18065 325 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 RND3P61587 244 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 SNRPD2P62316 118 aaKnown RBP13.65□□□□□ -0.22
TPM1-201ENST00000267996 SLC9A3R2Q15599 337 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 LIN54Q6MZP7 749 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 TRAT1Q6PIZ9 186 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 C1orf87Q8N0U7 546 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 ZNRF1Q8ND25 227 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 OR11H4Q8NGC9 324 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 COQ8AQ8NI60 647 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 GAFA1Q96PS6 74 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 NAA60Q9H7X0 242 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms