RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PCDHB16Q9NRJ7 776 aa15.11■□□□□ 0.01
SDF4-201ENST00000263741 NUBP2Q9Y5Y2 271 aa15.11■□□□□ 0.01
SDF4-201ENST00000263741 NF1P21359 2839 aa15.11■□□□□ 0.01
SDF4-201ENST00000263741 TMEM272A0A1B0GTI8 110 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 NOTOA8MTQ0 251 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 ECDO95905 644 aaPredicted RBP15.1■□□□□ 0.01
SDF4-201ENST00000263741 CCL3L1P16619 93 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 EFNB2P52799 333 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 SIGIRRQ6IA17 410 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 CHST4Q8NCG5 386 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 LY6G5BQ8NDX9 201 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 DYRK2Q92630 601 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 PCGF1Q9BSM1 259 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 SEBOXQ9HB31 216 aaPredicted RBP15.1■□□□□ 0.01
SDF4-201ENST00000263741 DIABLOQ9NR28 239 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 ZFHX3Q15911 3703 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 CUBNO60494 3623 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 IGHV3OR16-10A0A075B7F0 116 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 GPR37O15354 613 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 GLIPR1P48060 266 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 ERVFRD-1P60508 538 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 RPS27AP62979 156 aaKnown RBP15.1■□□□□ 0.01
SDF4-201ENST00000263741 PAX8Q06710 450 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 MPV17LQ2QL34 196 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 TOMM5Q8N4H5 51 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 KCNG3Q8TAE7 436 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 PLPPR1Q8TBJ4 325 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 DEDD2Q8WXF8 326 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 MRI1Q9BV20 369 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 DPCDQ9BVM2 203 aaPredicted RBP15.1■□□□□ 0.01
SDF4-201ENST00000263741 AUP1Q9Y679 476 aa15.1■□□□□ 0.01
SDF4-201ENST00000263741 MGST3O14880 152 aa15.09■□□□□ 0.01
SDF4-201ENST00000263741 PAHP00439 452 aa15.09■□□□□ 0.01
SDF4-201ENST00000263741 SNRPBP14678 240 aaKnown RBP15.09■□□□□ 0.01
SDF4-201ENST00000263741 NKAPLQ5M9Q1 402 aa15.09■□□□□ 0.01
SDF4-201ENST00000263741 TMEM200BQ69YZ2 307 aa15.09■□□□□ 0.01
SDF4-201ENST00000263741 C8orf46Q8TAG6 207 aa15.09■□□□□ 0.01
SDF4-201ENST00000263741 NEK7Q8TDX7 302 aa15.09■□□□□ 0.01
SDF4-201ENST00000263741 PHF21AQ96BD5 680 aa15.09■□□□□ 0.01
SDF4-201ENST00000263741 MRPS24Q96EL2 167 aaKnown RBP15.09■□□□□ 0.01
SDF4-201ENST00000263741 LPAR5Q9H1C0 372 aa15.09■□□□□ 0.01
SDF4-201ENST00000263741 GATA3P23771 443 aa15.08■□□□□ 0.01
SDF4-201ENST00000263741 RAB12Q6IQ22 244 aa15.08■□□□□ 0.01
SDF4-201ENST00000263741 LINC00596Q86U02 117 aa15.08■□□□□ 0.01
SDF4-201ENST00000263741 LGALS14Q8TCE9 139 aa15.08■□□□□ 0.01
SDF4-201ENST00000263741 SIRT7Q9NRC8 400 aa15.08■□□□□ 0.01
SDF4-201ENST00000263741 TRBV23-1A0A0A0MS06 115 aa15.08■□□□□ 0
SDF4-201ENST00000263741 TRAV39A0A0B4J263 110 aa15.08■□□□□ 0
SDF4-201ENST00000263741 C7orf66A4D0T2 115 aa15.08■□□□□ 0
SDF4-201ENST00000263741 J3QLI3 93 aa15.08■□□□□ 0
SDF4-201ENST00000263741 LDLRAD4O15165 306 aa15.08■□□□□ 0
SDF4-201ENST00000263741 LIPFP07098 398 aa15.08■□□□□ 0
SDF4-201ENST00000263741 CFPP27918 469 aa15.08■□□□□ 0
SDF4-201ENST00000263741 P2RX3P56373 397 aa15.08■□□□□ 0
SDF4-201ENST00000263741 Q5BKY6 102 aa15.08■□□□□ 0
SDF4-201ENST00000263741 KRBOX4Q5JUW0 171 aa15.08■□□□□ 0
SDF4-201ENST00000263741 OR2W3Q7Z3T1 314 aa15.08■□□□□ 0
SDF4-201ENST00000263741 PDZD9Q8IXQ8 264 aa15.08■□□□□ 0
SDF4-201ENST00000263741 OR5D13Q8NGL4 314 aa15.08■□□□□ 0
SDF4-201ENST00000263741 PPP1R35Q8TAP8 253 aa15.08■□□□□ 0
SDF4-201ENST00000263741 CMTM3Q96MX0 182 aa15.08■□□□□ 0
SDF4-201ENST00000263741 TBX15Q96SF7 602 aa15.08■□□□□ 0
SDF4-201ENST00000263741 SIRPDQ9H106 197 aa15.08■□□□□ 0
SDF4-201ENST00000263741 IFT22Q9H7X7 185 aa15.08■□□□□ 0
SDF4-201ENST00000263741 RCC2Q9P258 522 aaKnown RBP15.08■□□□□ 0
SDF4-201ENST00000263741 TMEM127O75204 238 aa15.07■□□□□ 0
SDF4-201ENST00000263741 HTR2BP41595 481 aa15.07■□□□□ 0
SDF4-201ENST00000263741 Q8N7P7 452 aa15.07■□□□□ 0
SDF4-201ENST00000263741 RANBP3Q9H6Z4 567 aaPredicted RBP15.07■□□□□ 0
SDF4-201ENST00000263741 NUDT15Q9NV35 164 aa15.07■□□□□ 0
SDF4-201ENST00000263741 KIF25Q9UIL4 384 aa15.07■□□□□ 0
SDF4-201ENST00000263741 HSPB11Q9Y547 144 aa15.07■□□□□ 0
SDF4-201ENST00000263741 TRAV40A0A0B4J280 105 aa15.07■□□□□ 0
SDF4-201ENST00000263741 SOCS1O15524 211 aa15.07■□□□□ 0
SDF4-201ENST00000263741 LANCL1O43813 399 aa15.07■□□□□ 0
SDF4-201ENST00000263741 MMP9P14780 707 aa15.07■□□□□ 0
SDF4-201ENST00000263741 METTL11BQ5VVY1 283 aa15.07■□□□□ 0
SDF4-201ENST00000263741 ZNF782Q6ZMW2 699 aaPredicted RBP15.07■□□□□ 0
SDF4-201ENST00000263741 C6orf201Q7Z4U5 140 aa15.07■□□□□ 0
SDF4-201ENST00000263741 TRAPPC6BQ86SZ2 158 aa15.07■□□□□ 0
SDF4-201ENST00000263741 TM2D1Q9BX74 207 aa15.07■□□□□ 0
SDF4-201ENST00000263741 A0A0A6YYJ9 748 aa15.06■□□□□ 0
SDF4-201ENST00000263741 UBE2QL1A1L167 161 aa15.06■□□□□ 0
SDF4-201ENST00000263741 TOX4O94842 621 aa15.06■□□□□ 0
SDF4-201ENST00000263741 CSN2P05814 226 aa15.06■□□□□ 0
SDF4-201ENST00000263741 IGHV4-38-2P0DP08 117 aa15.06■□□□□ 0
SDF4-201ENST00000263741 ANXA3P12429 323 aa15.06■□□□□ 0
SDF4-201ENST00000263741 VEGFCP49767 419 aa15.06■□□□□ 0
SDF4-201ENST00000263741 RAG2P55895 527 aa15.06■□□□□ 0
SDF4-201ENST00000263741 KLRD1Q13241 179 aa15.06■□□□□ 0
SDF4-201ENST00000263741 KLF17Q5JT82 389 aaPredicted RBP15.06■□□□□ 0
SDF4-201ENST00000263741 UBE2NLQ5JXB2 153 aa15.06■□□□□ 0
SDF4-201ENST00000263741 VMO1Q7Z5L0 202 aa15.06■□□□□ 0
SDF4-201ENST00000263741 OR5H6Q8NGV6 325 aa15.06■□□□□ 0
SDF4-201ENST00000263741 JMJD1CQ15652 2540 aa15.06■□□□□ 0
SDF4-201ENST00000263741 ODAMA1E959 279 aa15.05■□□□□ 0
SDF4-201ENST00000263741 CTDSPLO15194 276 aa15.05■□□□□ 0
SDF4-201ENST00000263741 SRP14P37108 136 aaKnown RBP15.05■□□□□ 0
SDF4-201ENST00000263741 MOGAT2Q3SYC2 334 aa15.05■□□□□ 0
SDF4-201ENST00000263741 ABHD1Q96SE0 405 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms