RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 S100A4P26447 101 aaKnown RBP9.39□□□□□ -0.91
CD44-201ENST00000263398 PRRX1P54821 245 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 RBM11P57052 281 aaKnown RBP9.39□□□□□ -0.91
CD44-201ENST00000263398 ERVS71-1P61550 626 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 TRIP6Q15654 476 aaKnown RBP9.39□□□□□ -0.91
CD44-201ENST00000263398 TMEM183BQ1AE95 376 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 FAM74A3Q4VXF1 159 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 TEX30Q5JUR7 227 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 BTNL3Q6UXE8 466 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 UNQ9370/PRO34162Q6UXP9 181 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 TCTEX1D1Q8N7M0 179 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 OR10A7Q8NGE5 316 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 CTHRC1Q96CG8 243 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 HSD17B10Q99714 261 aaKnown RBP9.39□□□□□ -0.91
CD44-201ENST00000263398 HDHD3Q9BSH5 251 aaPredicted RBP9.39□□□□□ -0.91
CD44-201ENST00000263398 THYN1Q9P016 225 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 RCC2Q9P258 522 aaKnown RBP9.39□□□□□ -0.91
CD44-201ENST00000263398 GPR132Q9UNW8 380 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 ARID2Q68CP9 1835 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 CASP8AP2Q9UKL3 1982 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 TRAV38-1A0A0B4J264 116 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 NCBP2LA6PVI3 153 aaKnown RBP9.39□□□□□ -0.91
CD44-201ENST00000263398 H3BQ15 152 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 PIN1P1O15428 100 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 FCGR3AP08637 254 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 SPINK2P20155 84 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 UBE2L3P68036 154 aaKnown RBP9.39□□□□□ -0.91
CD44-201ENST00000263398 RNF151Q2KHN1 245 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 KHDC1LQ5JSQ8 128 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 FAM219AQ8IW50 185 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 VPS25Q9BRG1 176 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 TRBV5-7A0A0A0MS05 114 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 AMTP48728 403 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 RPEL1Q2QD12 228 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 NCMAPQ5T1S8 102 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 FBXW9Q5XUX1 488 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 SLC22A18ASQ8N1D0 253 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 DEFB124Q8NES8 71 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 KCNK17Q96T54 332 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 NRIP2Q9BQI9 281 aa9.39□□□□□ -0.91
CD44-201ENST00000263398 CRISP2P16562 243 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 PTTG1IPP53801 180 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 TMEM50BP56557 158 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 KHDC3LQ587J8 217 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 ZNF660Q6AZW8 331 aaPredicted RBP9.38□□□□□ -0.91
CD44-201ENST00000263398 RNASEKQ6P5S7 137 aaKnown RBP9.38□□□□□ -0.91
CD44-201ENST00000263398 RNF122Q9H9V4 155 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 CNOT1A5YKK6 2376 aaKnown RBP9.38□□□□□ -0.91
CD44-201ENST00000263398 FAM74A7A6NL05 159 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 C4orf51C9J302 202 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 TOX4O94842 621 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 C3AR1Q16581 482 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 INO80CQ6PI98 192 aaPredicted RBP9.38□□□□□ -0.91
CD44-201ENST00000263398 OVCH2Q7RTZ1 564 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 CTXND1A0A1B0GTU2 59 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 A0A1W2PP11 408 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 SP1P08047 785 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 CCKARP32238 428 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
CD44-201ENST00000263398 SULT1A2P50226 295 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 Q56UQ5 140 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 OR2M7Q8NG81 312 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 HES7Q9BYE0 225 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 PRO1933Q9H354 126 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 NPDC1Q9NQX5 325 aaPredicted RBP9.38□□□□□ -0.91
CD44-201ENST00000263398 CACNA1EQ15878 2313 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 RBBP6Q7Z6E9 1792 aaKnown RBP9.38□□□□□ -0.91
CD44-201ENST00000263398 TDRD15B5MCY1 1934 aaKnown RBP9.38□□□□□ -0.91
CD44-201ENST00000263398 M0QZ24 198 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 CEACAM3P40198 252 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 ADAMTS17Q8TE56 1095 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 DYRK2Q92630 601 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 DOK5Q9P104 306 aa9.38□□□□□ -0.91
CD44-201ENST00000263398 PLXNA1Q9UIW2 1896 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 TRAV39A0A0B4J263 110 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 ERVH48-1M5A8F1 160 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 DCAF10Q5QP82 559 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 ZNF519Q8TB69 540 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 SLC25A40Q8TBP6 338 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 NPAS1Q99742 590 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 ONECUT1Q9UBC0 465 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 R4GN57 208 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 MYOFQ9NZM1 2061 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 OR5H1A6NKK0 313 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 TMEM210A6NLX4 147 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 IL11P20809 199 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 SERF2P84101 59 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 IFITM2Q01629 132 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 HIKESHIQ53FT3 197 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 FHL5Q5TD97 284 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 IL22RA2Q969J5 263 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 ORM2P19652 201 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 HTR1DP28221 377 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 CAMPP49913 170 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 PSG4Q00888 419 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 LINC01590Q5TEZ4 76 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 BHLHA15Q7RTS1 189 aaPredicted RBP9.37□□□□□ -0.91
CD44-201ENST00000263398 FAM181AQ8N9Y4 354 aa9.37□□□□□ -0.91
CD44-201ENST00000263398 PRSS3P2Q8NHM4 247 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms