RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 RNF150Q9ULK6 438 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 USF3Q68DE3 2245 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 CNOT1A5YKK6 2376 aaKnown RBP7.81□□□□□ -1.16
MSH4-201ENST00000263187 RPL36A-HNRNPH2H7BZ11 118 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 SIRPB1O00241 398 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 UBE2CO00762 179 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 HSPA12AO43301 675 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 WDR1O75083 606 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 CA11O75493 328 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 BMP5P22003 454 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 CA6P23280 308 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 SRD5A2P31213 254 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 CYB561P49447 251 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 ERVFRD-1P60508 538 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 ZXDAP98168 799 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 TMEM42Q69YG0 159 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 TIPARPQ7Z3E1 657 aaKnown RBP7.81□□□□□ -1.16
MSH4-201ENST00000263187 PPP1R32Q7Z5V6 425 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 Q8WTZ3 238 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 INTS12Q96CB8 462 aaKnown RBP7.81□□□□□ -1.16
MSH4-201ENST00000263187 C10orf35Q96D05 121 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 SIGLEC12Q96PQ1 595 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 WDR54Q9H977 334 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 PILRBQ9UKJ0 227 aa7.81□□□□□ -1.16
MSH4-201ENST00000263187 DMXL2Q8TDJ6 3036 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 SERPINE2P07093 398 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 MMP9P14780 707 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 MAGEA5P43359 124 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 RAB1AP62820 205 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 ZNF266Q14584 549 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 SPINK9Q5DT21 86 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 TMEM211Q6ICI0 200 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 SPNS3Q6ZMD2 512 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.8□□□□□ -1.16
MSH4-201ENST00000263187 M1APQ8TC57 530 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 TMPRSS5Q9H3S3 457 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 ZNF665Q9H7R5 613 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 Q9N2K0 584 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 WSB1Q9Y6I7 421 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 BDP1A6H8Y1 2624 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 CHD3Q12873 2000 aaKnown RBP7.8□□□□□ -1.16
MSH4-201ENST00000263187 AP4M1O00189 453 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 PGLYRP1O75594 196 aaPredicted RBP7.8□□□□□ -1.16
MSH4-201ENST00000263187 MMP7P09237 267 aaPredicted RBP7.8□□□□□ -1.16
MSH4-201ENST00000263187 DEFA4P12838 97 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 CEBPDP49716 269 aaPredicted RBP7.8□□□□□ -1.16
MSH4-201ENST00000263187 HMGN3Q15651 99 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 BEND4Q6ZU67 534 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 CXorf67Q86X51 503 aaPredicted RBP7.8□□□□□ -1.16
MSH4-201ENST00000263187 NECAP1Q8NC96 275 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 RBMXL1Q96E39 390 aaKnown RBP7.8□□□□□ -1.16
MSH4-201ENST00000263187 PLPPR2Q96GM1 343 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 HIST1H2AAQ96QV6 131 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 EGLN1Q9GZT9 426 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 SH2D2AQ9NP31 389 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 LYRM2Q9NU23 88 aaPredicted RBP7.8□□□□□ -1.16
MSH4-201ENST00000263187 TCFL5Q9UL49 500 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 STRAPQ9Y3F4 350 aaKnown RBP7.8□□□□□ -1.16
MSH4-201ENST00000263187 ATMQ13315 3056 aa7.8□□□□□ -1.16
MSH4-201ENST00000263187 TUSC2O75896 110 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 TRGC2P03986 189 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 FOLR2P14207 255 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 PCBD1P61457 104 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 ICAM4Q14773 271 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 OR8B8Q15620 311 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 OR8G2PQ6IF36 304 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 ALKBH2Q6NS38 261 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 ZNF880Q6PDB4 577 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 MKXQ8IYA7 352 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 ZDHHC23Q8IYP9 409 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 LRTM2Q8N967 370 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 OR5T1Q8NG75 326 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 EDARADDQ8WWZ3 215 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 PSMF1Q92530 271 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 GPR146Q96CH1 333 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 SF3B5Q9BWJ5 86 aaKnown RBP7.79□□□□□ -1.16
MSH4-201ENST00000263187 TAAR3PQ9P1P4 343 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 CACNG5Q9UF02 275 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 MGAQ8IWI9 3026 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 ROS1P08922 2347 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 SRP19P09132 144 aaKnown RBP7.79□□□□□ -1.16
MSH4-201ENST00000263187 ASCL4Q6XD76 172 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 SSX7Q7RTT5 188 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 WDR5BQ86VZ2 330 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 TCTEX1D2Q8WW35 142 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 DMXL1Q9Y485 3027 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 SPTBN2O15020 2390 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 SCAF4O95104 1147 aaKnown RBP7.79□□□□□ -1.16
MSH4-201ENST00000263187 CDS2O95674 445 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 IFNA17P01571 189 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 EIF2S3P41091 472 aaKnown RBP7.79□□□□□ -1.16
MSH4-201ENST00000263187 PAX9P55771 341 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 LINC00205P59089 165 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 ARL16Q0P5N6 197 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 SPANXN5Q5MJ07 72 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 PMS2CLQ68D20 193 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 UBALD2Q8IYN6 164 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 OR10J5Q8NHC4 309 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 PLPPR1Q8TBJ4 325 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 SSX3Q99909 188 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms