RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 DEFB108BQ8NET1 73 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 ASB13Q8WXK3 278 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 CST11Q9H112 138 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 ATG5Q9H1Y0 275 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 GHRLQ9UBU3 117 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 SRRM5B3KS81 715 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 GEMIN2O14893 280 aaKnown RBP23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 LHBP01229 141 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 CRYBA1P05813 215 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 GTF2F2P13984 249 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 DAOP14920 347 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 GABRR1P24046 479 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 TAF9Q16594 264 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 LDLRAD3Q86YD5 345 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 OR11L1Q8NGX0 322 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 ST3GAL6Q9Y274 331 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 ETV7Q9Y603 341 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 TANC2Q9HCD6 1990 aa23.06■■□□□ 1.28
SMARCD3-201ENST00000262188 VPS13CQ709C8 3753 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 OR2B11Q5JQS5 317 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 UBE2NLQ5JXB2 153 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 C10orf91Q5T1B1 145 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 OR2W3Q7Z3T1 314 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 OR51T1Q8NGJ9 327 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 RAB22AQ9UL26 194 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 IGHV4-39P01824 125 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 ART1P52961 327 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 FGF12P61328 243 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 RPS27AP62979 156 aaKnown RBP23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 SMCO1Q147U7 214 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 ACP7Q6ZNF0 438 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 SSX9Q7RTT3 188 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 NEU4Q8WWR8 484 aaPredicted RBP23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 ERGIC1Q969X5 290 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 PFDN5Q99471 154 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 HES4Q9HCC6 221 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 TAS2R3Q9NYW6 316 aa23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 CARHSP1Q9Y2V2 147 aaKnown RBP23.05■■□□□ 1.28
SMARCD3-201ENST00000262188 TMEM178BH3BS89 294 aa23.04■■□□□ 1.28
SMARCD3-201ENST00000262188 IRF2P14316 349 aa23.04■■□□□ 1.28
SMARCD3-201ENST00000262188 Q96M66 194 aa23.04■■□□□ 1.28
SMARCD3-201ENST00000262188 OR14J1Q9UGF5 321 aa23.04■■□□□ 1.28
SMARCD3-201ENST00000262188 SOCS1O15524 211 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 CFHR2P36980 270 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 RBM11P57052 281 aaKnown RBP23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 UBA52P62987 128 aaKnown RBP23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 BRICD5Q6PL45 260 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 Q8NFD4 153 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 MRI1Q9BV20 369 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 FBLN5Q9UBX5 448 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 CSMD1Q96PZ7 3565 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 NUDT19A8MXV4 375 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 F12P00748 615 aaPredicted RBP23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 SSX2Q16385 188 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 PUSL1Q8N0Z8 303 aaKnown RBP23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 TOMM5Q8N4H5 51 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 PERPQ96FX8 193 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 ZMAT3Q9HA38 289 aaKnown RBP23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 PIPOXQ9P0Z9 390 aa23.03■■□□□ 1.28
SMARCD3-201ENST00000262188 EFNA4P52798 201 aa23.02■■□□□ 1.28
SMARCD3-201ENST00000262188 BAIAP2L2Q6UXY1 529 aa23.02■■□□□ 1.28
SMARCD3-201ENST00000262188 TCTEX1D2Q8WW35 142 aa23.02■■□□□ 1.28
SMARCD3-201ENST00000262188 RDH5Q92781 318 aa23.02■■□□□ 1.28
SMARCD3-201ENST00000262188 LRRC30A6NM36 301 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 POM121CA8CG34 1229 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 GPR37O15354 613 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 TMEM127O75204 238 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 PTHLHP12272 177 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 RAB6AP20340 208 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 CDK2P24941 298 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 SCAND1P57086 179 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 SNRPEP62304 92 aaKnown RBP23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 PITPNAQ00169 270 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 ZNF660Q6AZW8 331 aaPredicted RBP23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 ZNF525Q8N782 197 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 RASL12Q9NYN1 266 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 DNAJB11Q9UBS4 358 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 METRNQ9UJH8 293 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 ARID1AO14497 2285 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 TRBV23-1A0A0A0MS06 115 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 TMEM218A2RU14 115 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 GIFP27352 417 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 FAM74A1Q5RGS3 127 aa23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 BARX1Q9HBU1 254 aaPredicted RBP23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 ASH1LQ9NR48 2969 aaKnown RBP23.01■■□□□ 1.27
SMARCD3-201ENST00000262188 C9orf170A2RU37 121 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 RFPL4AA6NLU0 287 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 RFPL4AL1F8VTS6 287 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 HSPB6O14558 160 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 LANCL1O43813 399 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 VAMP1P23763 118 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 FAM90A1Q86YD7 464 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 Q8IYB0 196 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 TMPRSS5Q9H3S3 457 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 C1orf196B1AJZ1 125 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 OR7C1O76099 320 aaPredicted RBP23■■□□□ 1.27
SMARCD3-201ENST00000262188 THAP6Q8TBB0 222 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 GCDHQ92947 438 aaPredicted RBP23■■□□□ 1.27
SMARCD3-201ENST00000262188 PTX4Q96A99 478 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 OCSTAMPQ9BR26 566 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms