RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 VN1R17PQ8TDU5 208 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 TMEM56Q96MV1 263 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 SIGLEC12Q96PQ1 595 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PARLQ9H300 379 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PLK3Q9H4B4 646 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 AURKAIP1Q9NWT8 199 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PLA2G3Q9NZ20 509 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 VDAC3Q9Y277 283 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PIGLQ9Y2B2 252 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PTRH2Q9Y3E5 179 aaKnown RBP6.23□□□□□ -1.41
CSDE1-201ENST00000261443 TMEM56-RWDD3S4R434 201 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 NPIPB13A6NJU9 1138 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 NPIPB4C9JG80 1138 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 CCL25O15444 150 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 YPEL1O60688 119 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 GYPAP02724 150 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 TCN2P20062 427 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 HNF1AP20823 631 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 IL3RAP26951 378 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 NPBWR2P48146 333 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PAX9P55771 341 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 TPPP2P59282 170 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 UBE2NP61088 152 aaKnown RBP6.23□□□□□ -1.41
CSDE1-201ENST00000261443 MFAP5Q13361 173 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 MMDQ15546 238 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 TESK1Q15569 626 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 FAM78BQ5VT40 261 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 CARD17Q5XLA6 110 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 Q6ZWC4 215 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PP6455Q8WZ26 134 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 LHX4Q969G2 390 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 TECTBQ96PL2 329 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 YPEL2Q96QA6 119 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 GPHA2Q96T91 129 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 GABRG3Q99928 467 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 SLC39A9Q9NUM3 307 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PPIAL4AQ9Y536 164 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 NKX6-3A6NJ46 265 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 AQP7O14520 342 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 SPRY1O43609 319 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-201ENST00000261443 TSPAN2O60636 221 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 DHRS3O75911 302 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 OR2J2O76002 312 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 TDGF1P13385 188 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 VDAC1P21796 283 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 CHRNA7P36544 502 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PSMB3P49720 205 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 GRB2P62993 217 aaKnown RBP6.23□□□□□ -1.41
CSDE1-201ENST00000261443 LCN2P80188 198 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 ZNF776Q68DI1 518 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-201ENST00000261443 RABEPKQ7Z6M1 372 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 AGBL5Q8NDL9 886 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PLPPR1Q8TBJ4 325 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 MRPL30Q8TCC3 161 aaKnown RBP6.23□□□□□ -1.41
CSDE1-201ENST00000261443 TMEM234Q8WY98 164 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 CRISPLD2Q9H0B8 497 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PATZ1Q9HBE1 687 aaKnown RBP6.23□□□□□ -1.41
CSDE1-201ENST00000261443 ZNF160Q9HCG1 818 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 PNRC2Q9NPJ4 139 aaKnown RBP6.23□□□□□ -1.41
CSDE1-201ENST00000261443 KLHL13Q9P2N7 655 aa6.23□□□□□ -1.41
CSDE1-201ENST00000261443 DUXBA0A1W2PPF3 345 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 C2orf72A6NCS6 295 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 F5H5K5 113 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 TMEM250H0YL14 139 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 H3BML4 177 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 SOX8P57073 446 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 KLF3P57682 345 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-201ENST00000261443 RPL15P61313 204 aaKnown RBP6.22□□□□□ -1.41
CSDE1-201ENST00000261443 RPS18P62269 152 aaKnown RBP6.22□□□□□ -1.41
CSDE1-201ENST00000261443 RNF151Q2KHN1 245 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 NMSQ5H8A3 153 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 ADPRHL1Q8NDY3 354 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 WDYHV1Q96HA8 205 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 BMFQ96LC9 184 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 MRPL13Q9BYD1 178 aaKnown RBP6.22□□□□□ -1.41
CSDE1-201ENST00000261443 RNF115Q9Y4L5 304 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 PXMP4Q9Y6I8 212 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 PRRC2CQ9Y520 2896 aaKnown RBP6.22□□□□□ -1.41
CSDE1-201ENST00000261443 GRIFINA4D1Z8 144 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 CLEC18AA5D8T8 446 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 TNFRSF10CO14798 259 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 CEACAM8P31997 349 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-201ENST00000261443 CDKN1AP38936 164 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 PAFAH1B2P68402 229 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 SERF2P84101 59 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 DLX2Q07687 328 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-201ENST00000261443 C1orf53Q5VUE5 145 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 FBXO46Q6PJ61 603 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-201ENST00000261443 CLEC18CQ8NCF0 446 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 OR4F5Q8NH21 305 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 OR4F4Q96R69 305 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 HSPB9Q9BQS6 159 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 PSMG3Q9BT73 122 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-201ENST00000261443 FRYQ5TBA9 3013 aa6.22□□□□□ -1.41
CSDE1-201ENST00000261443 A0A1W2PNV4 684 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 HMGB3O15347 200 aaKnown RBP6.21□□□□□ -1.41
CSDE1-201ENST00000261443 GALR2O43603 387 aaPredicted RBP6.21□□□□□ -1.41
CSDE1-201ENST00000261443 IGHG1P01857 330 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 OR5G3P0C626 314 aa6.21□□□□□ -1.41
CSDE1-201ENST00000261443 CCL5P13501 91 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms