RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 AESQ08117 197 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 SMAD4Q13485 552 aaKnown RBP8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 APCDD1LQ8NCL9 501 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 SLC25A38Q96DW6 304 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 KCNK7Q9Y2U2 307 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 KLRC4-KLRK1H3BQV0 150 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 PDE6DO43924 150 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 VDAC1P21796 283 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 LGALS4P56470 323 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 FLYWCH2Q96CP2 140 aaKnown RBP8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 PRSS27Q9BQR3 290 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 DTX4Q9Y2E6 619 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 MYO16Q9Y6X6 1858 aa8.56□□□□□ -1.04
CTDSPL2-201ENST00000260327 CACNA1IQ9P0X4 2223 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 HELTA6NFD8 242 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 COL9A1P20849 921 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 FCARP24071 287 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 LIMS1P48059 325 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 PIGYQ3MUY2 71 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 TMEM116Q8NCL8 245 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 OR4B1Q8NGF8 309 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 OR2T6Q8NHC8 308 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 RBM14Q96PK6 669 aaKnown RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 SUMO3P55854 103 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 ZNF124Q15973 351 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 GLRX5Q86SX6 157 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 ZNF764Q96H86 408 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 TRAV39A0A0B4J263 110 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 SP1P08047 785 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 SNRPCP09234 159 aaKnown RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 S100A4P26447 101 aaKnown RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 ERASQ7Z444 233 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 EIF4E3Q8N5X7 224 aaKnown RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 OR13G1Q8NGZ3 307 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 CES1P1Q9UKY3 287 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 COL5A3P25940 1745 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 A8MXK9 166 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 CYC1P08574 325 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 MNX1P50219 401 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 RND3P61587 244 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 FUT5Q11128 374 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 WDFY1Q8IWB7 410 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 FZR1Q9UM11 496 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 SF3B6Q9Y3B4 125 aaKnown RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 DSPPQ9NZW4 1301 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 LOC389332A0A1B0GUA5 103 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 NDUFB4O95168 129 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 ZXDCQ2QGD7 858 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 FDX2Q6P4F2 183 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 MRGPRDQ8TDS7 321 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 ASB10Q8WXI3 467 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 ZNF576Q9H609 170 aa8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 ZNF107Q9UII5 783 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL2-201ENST00000260327 CORTO00230 105 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 PSG2P11465 335 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 ZNF32P17041 273 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 PEBP1P30086 187 aaKnown RBP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 KIR3DL2P43630 455 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 WIPI1Q5MNZ9 446 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 CARFQ8N187 725 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 CLEC5AQ9NY25 188 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 CYR61O00622 381 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 MELTFP08582 738 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 ANKRD55Q3KP44 614 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 LYRM7Q5U5X0 104 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 H1FOOQ8IZA3 346 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 CACFD1Q9UGQ2 172 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 OTOFQ9HC10 1997 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 LRRC3CA6NJW4 275 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 LYG1Q8N1E2 194 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 ARL6IP6Q8N6S5 226 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 MOB3AQ96BX8 217 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 PGLYRP3Q96LB9 341 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 AAMDCQ9H7C9 122 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 CTXND1A0A1B0GTU2 59 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 ZNF729A6NN14 1252 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 P01737 135 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 OR1B1Q8NGR6 318 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 APOBEC3DQ96AK3 386 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 KCNMB2Q9Y691 235 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 UBR3Q6ZT12 1888 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 LDLRAD4O15165 306 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 HSPB1P04792 205 aaKnown RBP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 SRP14P37108 136 aaKnown RBP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 DSCR4P56555 118 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 GNG3P63215 75 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 EIF3IQ13347 325 aaKnown RBP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 FZD5Q13467 585 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 OIT3Q8WWZ8 545 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 TDRD15B5MCY1 1934 aaKnown RBP8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 DHRS7CA6NNS2 312 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 ZNF785A8K8V0 405 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 LMO7DNF2Z398 122 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 SMIM17P0DL12 118 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 PNLIPP16233 465 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 CD40P25942 277 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 SMIM21Q3B7S5 101 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 KIAA1644Q3SXP7 199 aa8.54□□□□□ -1.04
CTDSPL2-201ENST00000260327 KHDC1LQ5JSQ8 128 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms