RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 LMO4P61968 165 aa12.91□□□□□ -0.34
GYPC-201ENST00000259254 PAX5Q02548 391 aa12.91□□□□□ -0.34
GYPC-201ENST00000259254 MEF2CQ06413 473 aaPredicted RBP12.91□□□□□ -0.34
GYPC-201ENST00000259254 KIR2DS1Q14954 304 aa12.91□□□□□ -0.34
GYPC-201ENST00000259254 CHRFAM7AQ494W8 412 aa12.91□□□□□ -0.34
GYPC-201ENST00000259254 PRSS57Q6UWY2 283 aa12.91□□□□□ -0.34
GYPC-201ENST00000259254 BTN2A1Q7KYR7 527 aa12.91□□□□□ -0.34
GYPC-201ENST00000259254 PRR18Q8N4B5 295 aa12.91□□□□□ -0.34
GYPC-201ENST00000259254 Q96MF0 132 aa12.91□□□□□ -0.34
GYPC-201ENST00000259254 LPAR3Q9UBY5 353 aa12.91□□□□□ -0.34
GYPC-201ENST00000259254 RBMX2Q9Y388 322 aaKnown RBP12.91□□□□□ -0.34
GYPC-201ENST00000259254 TRBV23-1A0A0A0MS06 115 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 POM121CA8CG34 1229 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 TRDCB7Z8K6 153 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 ECDO95905 644 aaPredicted RBP12.9□□□□□ -0.34
GYPC-201ENST00000259254 FOSL1P15407 271 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 OR3A3P47888 321 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 TAS2R19P59542 299 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 HLA-DRB3P79483 266 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 DCTN2Q13561 401 aaKnown RBP12.9□□□□□ -0.34
GYPC-201ENST00000259254 CD276Q5ZPR3 534 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 ZNF880Q6PDB4 577 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 TRAT1Q6PIZ9 186 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 Q6ZPA2 131 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 ZNF565Q8N9K5 539 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 TMEM229BQ8NBD8 167 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 OR5H2Q8NGV7 314 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 UBALD1Q8TB05 177 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 SNAPC3Q92966 411 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 COX4I2Q96KJ9 171 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 NCOR1P1Q9H4R4 102 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 TAF9BQ9HBM6 251 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 ANXA10Q9UJ72 324 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 ANAPC10Q9UM13 185 aa12.9□□□□□ -0.34
GYPC-201ENST00000259254 ARID1AO14497 2285 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 LOC105371242A0A075B767 164 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 IGKV1D-8A0A087WSZ0 117 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 ANKRD20A5PA0PJZ0 165 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 FABP7O15540 132 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 PMP2P02689 132 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 CD3DP04234 171 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 GSTT2P0CG29 244 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 GZMHP20718 246 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 TAS2R46P59540 309 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 LCN2P80188 198 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 ACTBL2Q562R1 376 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 RNASE10Q5GAN6 216 aaKnown RBP12.89□□□□□ -0.35
GYPC-201ENST00000259254 STEAP3Q658P3 488 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 TMEM200BQ69YZ2 307 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 ARL11Q969Q4 196 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 LPAR2Q9HBW0 351 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 MBNL3Q9NUK0 354 aaKnown RBP12.89□□□□□ -0.35
GYPC-201ENST00000259254 CALYQ9NYX4 217 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 LINC00312Q9Y6C7 94 aa12.89□□□□□ -0.35
GYPC-201ENST00000259254 ACANP16112 2415 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 FLNAP21333 2647 aaKnown RBP12.88□□□□□ -0.35
GYPC-201ENST00000259254 A0A1W2PPH5 198 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 C12orf77C9JDV5 145 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 M0QYG6 137 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 SPINT2O43291 252 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 FOXH1O75593 365 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 RAB3DO95716 219 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 SCTP09683 121 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 AKAIN1P0CW23 69 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 NAT1P18440 290 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 IL2RGP31785 369 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 SSTR5P35346 364 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 FAUP35544 74 aaKnown RBP12.88□□□□□ -0.35
GYPC-201ENST00000259254 KLF9Q13886 244 aaPredicted RBP12.88□□□□□ -0.35
GYPC-201ENST00000259254 ZNF273Q14593 569 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 HMGN3Q15651 99 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 SRSF7Q16629 238 aaKnown RBP eCLIP12.88□□□□□ -0.35
GYPC-201ENST00000259254 LTC4SQ16873 150 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 STEAP1BQ6NZ63 245 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 C5orf24Q7Z6I8 188 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 LYSMD2Q8IV50 215 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 OR5AP2Q8NGF4 316 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 RFESDQ8TAC1 157 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 IL1F10Q8WWZ1 152 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 GAL3ST2Q9H3Q3 398 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 RAB9BQ9NP90 201 aa12.88□□□□□ -0.35
GYPC-201ENST00000259254 ZNF107Q9UII5 783 aaPredicted RBP12.88□□□□□ -0.35
GYPC-201ENST00000259254 RPUSD1Q9UJJ7 312 aaKnown RBP12.88□□□□□ -0.35
GYPC-201ENST00000259254 UBE2J1Q9Y385 318 aaPredicted RBP12.88□□□□□ -0.35
GYPC-201ENST00000259254 PPIAL4CA0A0B4J2A2 164 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 ZNF729A6NN14 1252 aaPredicted RBP12.87□□□□□ -0.35
GYPC-201ENST00000259254 CENPXA8MT69 81 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 C22orf46C9J442 243 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 FAM157AC9JC47 383 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 BET1O15155 118 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 HBZP02008 142 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 IFNA6P05013 189 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 PPIAL4GP0DN37 164 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 CCL3L1P16619 93 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 TBPP20226 339 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 ZFP36P26651 326 aaKnown RBP12.87□□□□□ -0.35
GYPC-201ENST00000259254 HRH1P35367 487 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 DEFA1P59665 94 aa12.87□□□□□ -0.35
GYPC-201ENST00000259254 DEFA3P59666 94 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms