RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 YIF1AO95070 293 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 OR5AC1P0C628 307 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 TBC1D28Q2M2D7 210 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 SLC25A40Q8TBP6 338 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 RTN4IP1Q8WWV3 396 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 RGCCQ9H4X1 137 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF286AQ9HBT8 521 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF107Q9UII5 783 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 SELLP14151 372 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 GLP1RP43220 463 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 TLE1Q04724 770 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 LTC4SQ16873 150 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 DMBX1Q8NFW5 382 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 ERGIC1Q969X5 290 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 MRPL24Q96A35 216 aaKnown RBP12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 SMIM8Q96KF7 97 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 PRDM14Q9GZV8 571 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 NECAP2Q9NVZ3 263 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 TREM2Q9NZC2 230 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 FBLN5Q9UBX5 448 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 FBXL17Q9UF56 701 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 COL27A1Q8IZC6 1860 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF724A8MTY0 619 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 HSPA12AO43301 675 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 AADACP22760 399 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 FPR2P25090 351 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 TAS2R31P59538 309 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 MIDNQ504T8 468 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF610Q8N9Z0 462 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 NANOS1Q8WY41 292 aaKnown RBP12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 ARHGAP21Q5T5U3 1957 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 HKR1P10072 659 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 VAX1Q5SQQ9 334 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 FAM214BQ7L5A3 538 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 ZADH2Q8N4Q0 377 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 TPRX1Q8N7U7 411 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 C2orf50Q96LR7 162 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 TM2D1Q9BX74 207 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 SH3BGRL3Q9H299 93 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 CACFD1Q9UGQ2 172 aa12.51□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF727A8MUV8 499 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 OMGP23515 440 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 RPL12P30050 165 aaKnown RBP12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 PPP1CBP62140 327 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 ACTBL2Q562R1 376 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 LYZL2Q7Z4W2 148 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 LINC00470Q9BZP3 86 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 RAB18Q9NP72 206 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 OSGIN2Q9Y236 505 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 C7orf77A4D0Y5 90 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 C5orf52A6NGY3 159 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 K7EPK0 472 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 TSPAN15O95858 294 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 IFNA2P01563 188 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 IGHV3-13P01766 116 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 IGHV3-7P01780 117 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 TMEM33P57088 247 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 S100A12P80511 92 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 FAM71E2Q8N5Q1 922 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 BCL2L2Q92843 193 aaPredicted RBP12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 SCGB3A2Q96PL1 93 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 RNF122Q9H9V4 155 aa12.5□□□□□ -0.41
TRAFD1-201ENST00000257604 NXPH2O95156 264 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 TBPP20226 339 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF83P51522 516 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 CEACAM21Q3KPI0 293 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 POC1AQ8NBT0 407 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 OR51H1Q8NH63 302 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 SNIP1Q8TAD8 396 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 C10orf35Q96D05 121 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 ZDHHC11Q9H8X9 412 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 WNT9BO14905 357 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 GPR37O15354 613 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 CD5P06127 495 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 HEXAP06865 529 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 EPHA1P21709 976 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 MPV17P39210 176 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 EIF2S3P41091 472 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 BTNL8Q6UX41 500 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF565Q8N9K5 539 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 DLL3Q9NYJ7 618 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 BMP5P22003 454 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 TMEM42Q69YG0 159 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 Q6ZPA2 131 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 MAGT1Q9H0U3 335 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 KCNIP3Q9Y2W7 256 aa12.49□□□□□ -0.41
TRAFD1-201ENST00000257604 WDR1O75083 606 aa12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 FBP1P09467 338 aa12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 MRPL49Q13405 166 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 IZUMO4Q1ZYL8 232 aa12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 PRAMEF6Q5VXH4 476 aa12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 C20orf204Q6ZNR8 217 aa12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 GMPPAQ96IJ6 420 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 TIMM8AO60220 97 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 CNOT4O95628 575 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 MPZP25189 248 aa12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 DVL1P1P54792 670 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms