RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 A0A1B0GUS0 222 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 LRRC3CA6NJW4 275 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 LIPT2A6NK58 231 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 SIRPB1O00241 398 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 DHHO43323 396 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 SCTP09683 121 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 GZMBP10144 247 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 THBS4P35443 961 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 TMEM92Q6UXU6 159 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 ST8SIA1Q92185 356 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 LRRC61Q9BV99 259 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 DOCK10Q96BY6 2186 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 LINC01565O15544 149 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 THBS3P49746 956 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 C11orf42Q8N5U0 333 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 ST6GALNAC3Q8NDV1 305 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 ADPRHL1Q8NDY3 354 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 FLVCR1-AS1Q8TAF5 88 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 TMEM171Q8WVE6 324 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 TP53I11O14683 189 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 DUX1O43812 170 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 VDAC1P21796 283 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 GPM6AP51674 278 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 SNAI3Q3KNW1 292 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 PLXDC1Q8IUK5 500 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 RAB24Q969Q5 203 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 ZNF385AQ96PM9 386 aaKnown RBP10.7□□□□□ -0.7
USP30-201ENST00000257548 DCAF16Q9NXF7 216 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 VAX2Q9UIW0 290 aa10.7□□□□□ -0.7
USP30-201ENST00000257548 MGST1P10620 155 aaKnown RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 FGF5P12034 268 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 GNG10P50151 68 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 NUTF2P61970 127 aaKnown RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 PPP1CBP62140 327 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 ZNF816Q0VGE8 651 aaPredicted RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 JOSD1Q15040 202 aaPredicted RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 VAMP3Q15836 100 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 GAB4Q2WGN9 574 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 PDLIM3Q53GG5 364 aaPredicted RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 TRIM61Q5EBN2 209 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 ZNF721Q8TF20 911 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 VSIRQ9H7M9 311 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 NAT8Q9UHE5 227 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 FER1L5A0AVI2 2057 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 KIF26AQ9ULI4 1882 aaPredicted RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 LOC390937A0A1W2PQ73 354 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 C20orf202A1L168 122 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 PDCD6O75340 191 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 EDDM3BP56851 147 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 ZNF468Q5VIY5 522 aaPredicted RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 YRDCQ86U90 279 aaKnown RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 SIGLECL1Q8N7X8 197 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 CMTM2Q8TAZ6 248 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 HSPB9Q9BQS6 159 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 MRPL37Q9BZE1 423 aaKnown RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 OPN3Q9H1Y3 402 aaPredicted RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 SPTY2D1-AS1A0A0U1RR47 76 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 CEACAM1P13688 526 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 DTYMKP23919 212 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 CNN1P51911 297 aaKnown RBP10.69□□□□□ -0.7
USP30-201ENST00000257548 AAED1Q7RTV5 226 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 ZNF439Q8NDP4 499 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 IFI44Q8TCB0 444 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 NINJ1Q92982 152 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 OXGR1Q96P68 337 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 GLRX2Q9NS18 164 aa10.69□□□□□ -0.7
USP30-201ENST00000257548 TRDCB7Z8K6 153 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 IGFBP4P22692 258 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 MDH2P40926 338 aaKnown RBP10.68□□□□□ -0.7
USP30-201ENST00000257548 LHFPL1Q86WI0 220 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 ATOH7Q8N100 152 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 OR1L3Q8NH93 324 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 SGMS2Q8NHU3 365 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 NAGKQ9UJ70 344 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 SPTA1P02549 2419 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 AKAP6Q13023 2319 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 COL4A3Q01955 1670 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 B4DEV8 164 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 C3orf80F5H4A9 247 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 ZFAND5O76080 213 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 MSX1P28360 303 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 TCL1AP56279 114 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 ACOT6Q3I5F7 207 aaPredicted RBP10.68□□□□□ -0.7
USP30-201ENST00000257548 FFAR4Q5NUL3 377 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 SLC22A18ASQ8N1D0 253 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 OR10V1Q8NGI7 309 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 CLDND2Q8NHS1 167 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 GPR27Q9NS67 375 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 KIAA1671Q9BY89 1806 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 PITX3O75364 302 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 CDS2O95674 445 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 HOXC4P09017 264 aaPredicted RBP10.68□□□□□ -0.7
USP30-201ENST00000257548 PSG2P11465 335 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 KIR2DL1P43626 348 aaPredicted RBP10.68□□□□□ -0.7
USP30-201ENST00000257548 NPBWR2P48146 333 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 Q6ZS52 159 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 OR5D13Q8NGL4 314 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 TUBD1Q9UJT1 453 aa10.68□□□□□ -0.7
USP30-201ENST00000257548 A0A1W2PQF6 199 aa10.67□□□□□ -0.7
USP30-201ENST00000257548 ZNF32P17041 273 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms