RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ATP1B2P14415 290 aaPredicted RBP5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 PLP2Q04941 152 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 TMEM91Q6ZNR0 172 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 DGAT2L6Q6ZPD8 337 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 PGBD5Q8N414 524 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 WNT6Q9Y6F9 365 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 FIGNL2A6NMB9 653 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 CXCL1P09341 107 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 LIMS3P0CW19 117 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 LIMS4P0CW20 117 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 CCL7P80098 99 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 MPV17L2Q567V2 206 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 PNPLA1Q8N8W4 532 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 AQP10Q96PS8 301 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 CES1P1Q9UKY3 287 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 HS3ST2Q9Y278 367 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 CHD5Q8TDI0 1954 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 OR51F1A6NGY5 319 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 TMEM212A6NML5 194 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 K7EP34 96 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 KLF4O43474 513 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 FAHP16930 419 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 PGGT1BP53609 377 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 RPL32P62910 135 aaKnown RBP5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 PDE7AQ13946 482 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 NKG7Q16617 165 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 GPR132Q9UNW8 380 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 RCL1Q9Y2P8 373 aaKnown RBP5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 TCRBV5S1A1TA0A578 114 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 PHF1O43189 567 aaPredicted RBP5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 NUDT14O95848 222 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 DANCRP0C864 163 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 ELAVL4P26378 380 aaKnown RBP5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 ZNF93P35789 620 aaPredicted RBP5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 RND3P61587 244 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 NTHL1P78549 312 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 RNPS1Q15287 305 aaKnown RBP5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 OR13H1Q8NG92 308 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 OR4X2Q8NGF9 303 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 GPR150Q8NGU9 434 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 OR5P2Q8WZ92 322 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 NRN1Q9NPD7 142 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 TMEM242Q9NWH2 141 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 TMEM160Q9NX00 188 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 TRAV25A0A0B4J276 109 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 hCG_38984A0A1B0GV85 526 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 hADV38S2A0JD32 116 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 RAMP1O60894 148 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 LHX2P50458 406 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 CEACAM16Q2WEN9 425 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC25A42Q86VD7 318 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 LINC00346Q8IVM7 164 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 LYPD6BQ8NI32 183 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 KHSRPQ92945 711 aaKnown RBP eCLIP5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 KLF16Q9BXK1 252 aaPredicted RBP5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 CRISPLD2Q9H0B8 497 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 WDR76Q9H967 626 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 PCM1Q15154 2024 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 MMP23AO75900 390 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 TOMM40O96008 361 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 TRMT12Q53H54 448 aaKnown RBP5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 C10orf91Q5T1B1 145 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 NPWQ8N729 165 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 CYB5D2Q8WUJ1 264 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC38A5Q8WUX1 472 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 MRGPRX3Q96LB0 322 aa5.94□□□□□ -1.46
PDGFRA-201ENST00000257290 NRG2O14511 850 aaPredicted RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 CLDN7O95471 211 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 HLA-DQA1P01909 254 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 SBK3P0C264 359 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 CDKN2AP42771 156 aaKnown RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 NMUP48645 174 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 FMODQ06828 376 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 LY6G5CQ5SRR4 150 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 GDF7Q7Z4P5 450 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC25A40Q8TBP6 338 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 SAP30LQ9HAJ7 183 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 CLDND1Q9NY35 253 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 TRGV10A0A0A0MS01 117 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 SHISA7A6NL88 538 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 GPX2P18283 190 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 RELBQ01201 579 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 OLIG2Q13516 323 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 MRPL23Q16540 153 aaKnown RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 PAQR9Q6ZVX9 377 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 FADS6Q8N9I5 356 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 OR52E1Q8NGJ3 308 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC25A28Q96A46 364 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 NXT1Q9UKK6 140 aaKnown RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 SCN9AQ15858 1988 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 A0A0U1RQS6 177 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 ZC3H12DA2A288 527 aaKnown RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 TMEM250H0YL14 139 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 LEPROTL1O95214 131 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 RPS18P62269 152 aaKnown RBP5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 FUT5Q11128 374 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 SPRED2Q7Z698 418 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 OR2T6Q8NHC8 308 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 ST6GALNAC6Q969X2 333 aa5.93□□□□□ -1.46
PDGFRA-201ENST00000257290 DERL3Q96Q80 235 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms