RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 CLDN1O95832 211 aa14.36□□□□□ -0.11
CDKN1A-201ENST00000244741 NKX6-1P78426 367 aaPredicted RBP14.36□□□□□ -0.11
CDKN1A-201ENST00000244741 BATF2Q8N1L9 274 aa14.36□□□□□ -0.11
CDKN1A-201ENST00000244741 MRPL24Q96A35 216 aaKnown RBP14.36□□□□□ -0.11
CDKN1A-201ENST00000244741 DNAJB11Q9UBS4 358 aa14.36□□□□□ -0.11
CDKN1A-201ENST00000244741 NBPF19A0A087WUL8 3843 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 SHISA9B4DS77 424 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 ARID1AO14497 2285 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 CD3EP07766 207 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 FAM157CP0CG43 387 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 PET100P0DJ07 73 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 PIGPP57054 158 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 ZNF273Q14593 569 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 DAZAP2Q15038 168 aaPredicted RBP14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 Q6ZPA2 131 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 TMEM171Q8WVE6 324 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 NARS2Q96I59 477 aaKnown RBP14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 CELSR2Q9HCU4 2923 aa14.35□□□□□ -0.11
CDKN1A-201ENST00000244741 CD300LBA8K4G0 201 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 ZNF728P0DKX0 622 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 IGFBP2P18065 325 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 NPBWR2P48146 333 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 SP6Q3SY56 376 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 GGNBP1Q5YKI7 109 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 OR2S2Q9NQN1 319 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 RAB19A4D1S5 217 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 PDCD6O75340 191 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 HKR1P10072 659 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 GCH1P30793 250 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 RBM11P57052 281 aaKnown RBP14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 FXYD4P59646 89 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 DEFA5Q01523 94 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 SLC25A26Q70HW3 274 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 SSX8Q7RTT4 187 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 ZNF611Q8N823 705 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 LHFPL5Q8TAF8 219 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 RNF141Q8WVD5 230 aa14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 PAPOLGQ9BWT3 736 aaKnown RBP14.34□□□□□ -0.11
CDKN1A-201ENST00000244741 IGHV3-64DA0A0J9YX35 117 aa14.33□□□□□ -0.11
CDKN1A-201ENST00000244741 ATF4P18848 351 aaPredicted RBP14.33□□□□□ -0.11
CDKN1A-201ENST00000244741 FCGR2CP31995 323 aa14.33□□□□□ -0.11
CDKN1A-201ENST00000244741 GLRXP35754 106 aa14.33□□□□□ -0.11
CDKN1A-201ENST00000244741 ZNF718Q3SXZ3 478 aa14.33□□□□□ -0.11
CDKN1A-201ENST00000244741 FBXW12Q6X9E4 464 aa14.33□□□□□ -0.11
CDKN1A-201ENST00000244741 GTF3AQ92664 365 aaKnown RBP14.33□□□□□ -0.11
CDKN1A-201ENST00000244741 TECTBQ96PL2 329 aa14.33□□□□□ -0.11
CDKN1A-201ENST00000244741 RNF115Q9Y4L5 304 aa14.33□□□□□ -0.11
CDKN1A-201ENST00000244741 E7EQL1 145 aa14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 TIMM8AO60220 97 aaPredicted RBP14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 CA6P23280 308 aa14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 COL8A1P27658 744 aa14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 LOXP28300 417 aaPredicted RBP14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 AKR1C2P52895 323 aa14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 AKR1C1Q04828 323 aa14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 TMEM187Q14656 261 aa14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 RPL7L1Q6DKI1 246 aaKnown RBP14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 UQCC3Q6UW78 93 aa14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 MRPL37Q9BZE1 423 aaKnown RBP14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 FGF23Q9GZV9 251 aaPredicted RBP14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 NAA60Q9H7X0 242 aa14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 MSL2Q9HCI7 577 aa14.33□□□□□ -0.12
CDKN1A-201ENST00000244741 IFNA21P01568 189 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 FUT3P21217 361 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 PHLDA2Q53GA4 152 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 LILRB1Q8NHL6 650 aaPredicted RBP14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 RTN4IP1Q8WWV3 396 aaPredicted RBP14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 ZNF286AQ9HBT8 521 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 KCNIP3Q9Y2W7 256 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 J3QW42 95 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 OR7C1O76099 320 aaPredicted RBP14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 OR4A8P0C604 315 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 OR5AC1P0C628 307 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 RAC2P15153 192 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 MST1LQ2TV78 715 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 ABCA11PQ4W5N1 156 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 ZNF442Q9H7R0 627 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 PCDHB16Q9NRJ7 776 aa14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 PURGQ9UJV8 347 aaKnown RBP14.32□□□□□ -0.12
CDKN1A-201ENST00000244741 A0A1W2PPR1 153 aa14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 PQLC2LA1A4F0 135 aa14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 TMEM218A2RU14 115 aa14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 DNASE2O00115 360 aaPredicted RBP14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 DEDDO75618 318 aa14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 RCC1P18754 421 aaPredicted RBP14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 SRSF3P84103 164 aaKnown RBP14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 ADIPOQQ15848 244 aa14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 NUP37Q8NFH4 326 aa14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 C12orf4Q9NQ89 552 aa14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 ZC4H2Q9NQZ6 224 aa14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 CISD1Q9NZ45 108 aaKnown RBP14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 LSM5Q9Y4Y9 91 aaKnown RBP14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 KLF2Q9Y5W3 355 aaPredicted RBP14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 CSMD2Q7Z408 3487 aa14.31□□□□□ -0.12
CDKN1A-201ENST00000244741 ZNF705EA8MWA4 302 aaPredicted RBP14.3□□□□□ -0.12
CDKN1A-201ENST00000244741 H0YL77 283 aa14.3□□□□□ -0.12
CDKN1A-201ENST00000244741 TRIM77I1YAP6 450 aa14.3□□□□□ -0.12
CDKN1A-201ENST00000244741 RPL12P30050 165 aaKnown RBP14.3□□□□□ -0.12
CDKN1A-201ENST00000244741 PRDX4Q13162 271 aa14.3□□□□□ -0.12
CDKN1A-201ENST00000244741 MBNL2Q5VZF2 373 aaKnown RBP14.3□□□□□ -0.12
CDKN1A-201ENST00000244741 OR11L1Q8NGX0 322 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms