RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 HLA-AP01891 365 aaKnown RBP11.09□□□□□ -0.63
SLIRP-201ENST00000238688 HPXP02790 462 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 VSIG10L2P0DP72 767 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 MUC1P15941 1255 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-201ENST00000238688 C4BPBP20851 252 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 S100GP29377 79 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 APOBEC3AP31941 199 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-201ENST00000238688 GZMKP49863 264 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 HERV-K104P61576 105 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 IL13RA1P78552 427 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 HLA-DRB3P79483 266 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 CD83Q01151 205 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 SRSF4Q08170 494 aaKnown RBP11.09□□□□□ -0.63
SLIRP-201ENST00000238688 C6orf183Q5T699 404 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 TMED4Q7Z7H5 227 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 C1orf87Q8N0U7 546 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 CCDC71LQ8N9Z2 235 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 OR2AK2Q8NG84 335 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 OR11H7Q8NGC8 314 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 MRPL30Q8TCC3 161 aaKnown RBP11.09□□□□□ -0.63
SLIRP-201ENST00000238688 LRRC29Q8WV35 223 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 MRGPRFQ96AM1 343 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 WDR13Q9H1Z4 485 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 BEX4Q9NWD9 120 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-201ENST00000238688 C1orf123Q9NWV4 160 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 RNF7Q9UBF6 113 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 ZNF230Q9UIE0 474 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-201ENST00000238688 POU2F3Q9UKI9 436 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 RNF115Q9Y4L5 304 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 NSD1Q96L73 2696 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-201ENST00000238688 C17orf100A8MU93 164 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 OR4A8P0C604 315 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 IRF2P14316 349 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 HOXB4P17483 251 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-201ENST00000238688 SERPINF1P36955 418 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 SRPXP78539 464 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 TNFAIP6P98066 277 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-201ENST00000238688 CYCSP99999 105 aaKnown RBP11.08□□□□□ -0.64
SLIRP-201ENST00000238688 FGL1Q08830 312 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 MSMO1Q15800 293 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 MSMPQ1L6U9 139 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 TMEM30BQ3MIR4 351 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 MUC20Q8N307 709 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-201ENST00000238688 OR5D13Q8NGL4 314 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 COQ8AQ8NI60 647 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 MARCH1Q8TCQ1 289 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 SEC22CQ9BRL7 303 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 ZNF2Q9BSG1 426 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-201ENST00000238688 HDHD3Q9BSH5 251 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-201ENST00000238688 TMPRSS13Q9BYE2 586 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 FAM234AQ9H0X4 552 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 C5orf66Q9H5L9 145 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 KCNIP1Q9NZI2 227 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 MGAT4CQ9UBM8 478 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 ZNF222Q9UK12 451 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 FZR1Q9UM11 496 aa11.08□□□□□ -0.64
SLIRP-201ENST00000238688 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-201ENST00000238688 C9orf170A2RU37 121 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 TUSC2O75896 110 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 PLAUP00749 431 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 IGHV1-46P01743 117 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 WNT2P09544 360 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 ZNF728P0DKX0 622 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 FOSL1P15407 271 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 CD34P28906 385 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 GMFBP60983 142 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 RND3P61587 244 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 ADAM5Q6NVV9 412 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 KCTD9Q7L273 389 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 RTN4RL2Q86UN3 420 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 LRP11Q86VZ4 500 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 SGPP2Q8IWX5 399 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 RDH5Q92781 318 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 GALNT14Q96FL9 552 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 PLPPR2Q96GM1 343 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 KIRREL1Q96J84 757 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 SNX22Q96L94 193 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 ZNF488Q96MN9 340 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 TMEM204Q9BSN7 226 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 RAB18Q9NP72 206 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 KCNIP3Q9Y2W7 256 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 ZANQ9Y493 2812 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 DYSFO75923 2080 aa11.07□□□□□ -0.64
SLIRP-201ENST00000238688 IGKV1D-8A0A087WSZ0 117 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 TRBV6-7A0A0A0MS04 114 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 OOEPA6NGQ2 149 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 OR5H14A6NHG9 310 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 HS3ST1O14792 307 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 MGST3O14880 152 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 SLC22A5O76082 557 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 SFT2D2O95562 160 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 PGAM2P15259 253 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 FCGR2CP31995 323 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 NPY4RP50391 375 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 CD300CQ08708 224 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 PPP1R1AQ13522 171 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 PRAMEF6Q5VXH4 476 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 ALKBH2Q6NS38 261 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms