RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 OMGP23515 440 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 ARSJQ5FYB0 599 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 LAMA5O15230 3695 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 TPPPO94811 219 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 IGHV2-70P01814 119 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 CEACAM6P40199 344 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 TMEM255AQ5JRV8 349 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 TMED4Q7Z7H5 227 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 LINC01356Q8N9X3 169 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 S1PR3Q99500 378 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 DPAGT1Q9H3H5 408 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 CALYQ9NYX4 217 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 ZNF729A6NN14 1252 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 M0QYG6 137 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 LHBP01229 141 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 HLA-DRB3P79483 266 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 CDK10Q15131 360 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 OLFML2AQ68BL7 652 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 SIRT7Q9NRC8 400 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 KLK11Q9UBX7 282 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 METRNQ9UJH8 293 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 TMEM82A0PJX8 343 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 PSPNO60542 156 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 IGHV3-7P01780 117 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 MT-ND4P03905 459 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 LUMP51884 338 aaPredicted RBP9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 SSBP1Q04837 148 aaKnown RBP9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 PLA2G7Q13093 441 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 ZNF260Q3ZCT1 412 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 SMIM4Q8WVI0 70 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 MIXL1Q9H2W2 232 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 AUP1Q9Y679 476 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 LINC00312Q9Y6C7 94 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 CFAP47Q6ZTR5 3102 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 NAP1L6A6NFF2 107 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 TOX4O94842 621 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 GPR12P47775 334 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 LPCAT3Q6P1A2 487 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 PRSS57Q6UWY2 283 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 SPNS3Q6ZMD2 512 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 SUCNR1Q9BXA5 334 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 MS4A7Q9GZW8 240 aaPredicted RBP9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 HIF1ANQ9NWT6 349 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 KCNIP3Q9Y2W7 256 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 AMMECR1Q9Y4X0 333 aaPredicted RBP9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 RCC1P18754 421 aaPredicted RBP9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 FCGR2CP31995 323 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 RBMXP38159 391 aaKnown RBP9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 CEACAM3P40198 252 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 CCDC190Q86UF4 302 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 FAM89BQ8N5H3 189 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 CITED4Q96RK1 184 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 SLC5A7Q9GZV3 580 aa9.27□□□□□ -0.93
TNFAIP3-201ENST00000237289 IGHV4-61A0A0C4DH41 118 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 HBZP02008 142 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 FCGR3AP08637 254 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 WNT2P09544 360 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 TBPP20226 339 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 HRH1P35367 487 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 TMEM50BP56557 158 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 LSAMPQ13449 338 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 STEAP3Q658P3 488 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 GVQW1Q8N7I0 195 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 RPEQ96AT9 228 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 ABHD1Q96SE0 405 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 ANXA10Q9UJ72 324 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 UBE2J1Q9Y385 318 aaPredicted RBP9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 RP2O75695 350 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 ATPAF1Q5TC12 328 aaPredicted RBP9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 Q6P435 159 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 CCDC71LQ8N9Z2 235 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 ZBTB8BQ8NAP8 495 aaPredicted RBP9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR4A4PQ8NGN8 299 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 ZFAND1Q8TCF1 268 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 C17orf50Q8WW18 174 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 PPP1R14BQ96C90 147 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 ZNF2Q9BSG1 426 aaPredicted RBP9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 IDI2-AS1Q9NZ38 188 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 RPUSD1Q9UJJ7 312 aaKnown RBP9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 KALRNO60229 2985 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 MFNGO00587 321 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 DHFRP00374 187 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 MSMBP08118 114 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 RFX2P48378 723 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 RAB7AP51149 207 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 HES1Q14469 280 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 PLAC9Q5JTB6 97 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 LYG1Q8N1E2 194 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 PLPPR1Q8TBJ4 325 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 ZNF596Q8TC21 504 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 CREB3L1Q96BA8 519 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 HES4Q9HCC6 221 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 TAS2R3Q9NYW6 316 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 RNF150Q9ULK6 438 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 CFAP46Q8IYW2 2715 aa9.26□□□□□ -0.93
TNFAIP3-201ENST00000237289 TRAV20A0A0B4J274 112 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 IL7P13232 177 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 NFYAP23511 347 aaPredicted RBP9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 VAMP1P23763 118 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 ETV6P41212 452 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms