RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 KIR2DL2P43627 348 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-201ENST00000237186 ID3Q02535 119 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 SRSF6Q13247 344 aaKnown RBP13.72□□□□□ -0.21
UBE3D-201ENST00000237186 ZNF497Q6ZNH5 498 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 GCNT2Q8N0V5 402 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 TUBG2Q9NRH3 451 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 F8W036 122 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 SLC33A1O00400 549 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-201ENST00000237186 HSD17B6O14756 317 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 PVALBP20472 110 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-201ENST00000237186 F2RP25116 425 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 S100GP29377 79 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 RAB5CP51148 216 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 NHLH2Q02577 135 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 PSG7Q13046 419 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 ZNF154Q13106 437 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 PUSL1Q8N0Z8 303 aaKnown RBP13.72□□□□□ -0.21
UBE3D-201ENST00000237186 OR2C3Q8N628 320 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 SARAFQ96BY9 339 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 WIPI2Q9Y4P8 454 aa13.72□□□□□ -0.21
UBE3D-201ENST00000237186 ARHGAP21Q5T5U3 1957 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 C1QTNF9BB2RNN3 333 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 RNASEK-C17orf49H0YIS7 233 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 ADAM20O43506 726 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 CEACAM4O75871 244 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 WISP2O76076 250 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 OR2H2O95918 312 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 SLC25A6P12236 298 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 MUC1P15941 1255 aaPredicted RBP13.71□□□□□ -0.21
UBE3D-201ENST00000237186 ERVS71-1P61550 626 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 EWSR1Q01844 656 aaKnown RBP eCLIP13.71□□□□□ -0.21
UBE3D-201ENST00000237186 GUCA2BQ16661 112 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 Q6ZRG5 221 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 OR1J1Q8NGS3 322 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 ADAT1Q9BUB4 502 aaKnown RBP13.71□□□□□ -0.21
UBE3D-201ENST00000237186 TLNRD1Q9H1K6 362 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 TREM1Q9NP99 234 aa13.71□□□□□ -0.21
UBE3D-201ENST00000237186 MBNL3Q9NUK0 354 aaKnown RBP13.71□□□□□ -0.21
UBE3D-201ENST00000237186 ARID1AO14497 2285 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 A0A1W2PR80 420 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 CDIPTO14735 213 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 ATF4P18848 351 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-201ENST00000237186 POLR2GP62487 172 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBE3D-201ENST00000237186 ALKBH6Q3KRA9 238 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 CLEC9AQ6UXN8 241 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 COMMD1Q8N668 190 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 WDR31Q8NA23 367 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 PLPPR1Q8TBJ4 325 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 KLF14Q8TD94 323 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-201ENST00000237186 AKR1E2Q96JD6 320 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 COL25A1Q9BXS0 654 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-201ENST00000237186 PLEKHF2Q9H8W4 249 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 HES4Q9HCC6 221 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 LYRM2Q9NU23 88 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-201ENST00000237186 ERRFI1Q9UJM3 462 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-201ENST00000237186 MUC6Q6W4X9 2439 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 FAM74A7A6NL05 159 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 NUPL2O15504 423 aaKnown RBP13.7□□□□□ -0.22
UBE3D-201ENST00000237186 LMO1P25800 156 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 DVL1P1P54792 670 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-201ENST00000237186 IGFBP7Q16270 282 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 SWI5Q1ZZU3 235 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 FAM74A3Q4VXF1 159 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 C9orf106Q8NAJ2 232 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 OR10V1Q8NGI7 309 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 SLC25A31Q9H0C2 315 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 PLSCR4Q9NRQ2 329 aa13.7□□□□□ -0.22
UBE3D-201ENST00000237186 PURGQ9UJV8 347 aaKnown RBP13.7□□□□□ -0.22
UBE3D-201ENST00000237186 STRAPQ9Y3F4 350 aaKnown RBP13.7□□□□□ -0.22
UBE3D-201ENST00000237186 CELSR3Q9NYQ7 3312 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 C3orf80F5H4A9 247 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 SH2D1BO14796 132 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 PITX3O75364 302 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 H2AFB1P0C5Y9 115 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 CEACAM1P13688 526 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 SPINK2P20155 84 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 TESK1Q15569 626 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 CXorf66Q5JRM2 361 aaPredicted RBP13.69□□□□□ -0.22
UBE3D-201ENST00000237186 LUZP4Q9P127 313 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 CACFD1Q9UGQ2 172 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 ZNF292O60281 2723 aa13.69□□□□□ -0.22
UBE3D-201ENST00000237186 CNOT1A5YKK6 2376 aaKnown RBP13.69□□□□□ -0.22
UBE3D-201ENST00000237186 ZFHX2Q9C0A1 2572 aaPredicted RBP13.68□□□□□ -0.22
UBE3D-201ENST00000237186 RIF1Q5UIP0 2472 aaKnown RBP13.68□□□□□ -0.22
UBE3D-201ENST00000237186 FAM24AA6NFZ4 105 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 AHRRA9YTQ3 701 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 FAM157AC9JC47 383 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 TM4SF5O14894 197 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 SNAPINO95295 136 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 IGLV2-14P01704 120 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 HEXAP06865 529 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 ZNF169Q14929 603 aaPredicted RBP13.68□□□□□ -0.22
UBE3D-201ENST00000237186 SMUG1Q53HV7 270 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 CNEP1R1Q8N9A8 125 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 CLRN3Q8NCR9 226 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 OR8G5Q8NG78 346 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 GPHA2Q96T91 129 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 TMEM231Q9H6L2 316 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 FAM96BQ9Y3D0 163 aa13.68□□□□□ -0.22
UBE3D-201ENST00000237186 A0A1B0GU03 582 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms