RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 KREMEN2Q8NCW0 462 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 OR10AG1Q8NH19 301 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 OR2T6Q8NHC8 308 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 RTBDNQ9BSG5 229 aaPredicted RBP11.27□□□□□ -0.61
VAMP4-201ENST00000236192 TMEM70Q9BUB7 260 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 ABCA3Q99758 1704 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 ZNF891A8MT65 544 aaPredicted RBP11.26□□□□□ -0.61
VAMP4-201ENST00000236192 TCTAP57738 103 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 MRPL49Q13405 166 aaKnown RBP11.26□□□□□ -0.61
VAMP4-201ENST00000236192 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
VAMP4-201ENST00000236192 NKX2-2O95096 273 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 CNIH1O95406 144 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 ERGP11308 486 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 TMEM187Q14656 261 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 LINC00615Q96LM1 132 aaPredicted RBP11.26□□□□□ -0.61
VAMP4-201ENST00000236192 SEC13P55735 322 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 PRSS3P2Q8NHM4 247 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 RHBDD1Q8TEB9 315 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 LEPROTL1O95214 131 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 HLA-DRB1P01911 266 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 RRADP55042 308 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 ADAMTSL4Q6UY14 1074 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 OR5D13Q8NGL4 314 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 ATP6V0BQ99437 205 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 ANAPC13Q9BS18 74 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 PKIBQ9C010 78 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 GTSF1LQ9H1H1 148 aa11.26□□□□□ -0.61
VAMP4-201ENST00000236192 SPRY1O43609 319 aaPredicted RBP11.25□□□□□ -0.61
VAMP4-201ENST00000236192 FAHP16930 419 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 TSPOP30536 169 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 RHOBP62745 196 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 CCL25O15444 150 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 RBFOX2O43251 390 aaKnown RBP eCLIP11.25□□□□□ -0.61
VAMP4-201ENST00000236192 CA1P00915 261 aaPredicted RBP11.25□□□□□ -0.61
VAMP4-201ENST00000236192 SCGB1C2P0DMR2 95 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 MC5RP33032 325 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 RPS4XP62701 263 aaKnown RBP11.25□□□□□ -0.61
VAMP4-201ENST00000236192 C11orf40Q8WZ69 217 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 TPPP3Q9BW30 176 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 C7orf71A4D174 169 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 ANKRD30BLA7E2S9 258 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 H3BUT2 72 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 RER1O15258 196 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 MAS1LP35410 378 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 APOBEC1P41238 236 aaKnown RBP11.25□□□□□ -0.61
VAMP4-201ENST00000236192 CSN1S1P47710 185 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 SOX8P57073 446 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 FKBP1BP68106 108 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 EIF3IQ13347 325 aaKnown RBP11.25□□□□□ -0.61
VAMP4-201ENST00000236192 SSPNQ14714 243 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 DEFB110Q30KQ9 67 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 SELENOHQ8IZQ5 122 aaKnown RBP11.25□□□□□ -0.61
VAMP4-201ENST00000236192 PPYP01298 95 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 NPY1RP25929 384 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 IL3RAP26951 378 aa11.25□□□□□ -0.61
VAMP4-201ENST00000236192 PTRH2Q9Y3E5 179 aaKnown RBP11.25□□□□□ -0.61
VAMP4-201ENST00000236192 KIR2DL5BA0A0G2JN68 375 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 KIR2DL5BA0A0G2JPC4 375 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 IGSF23A1L1A6 192 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 HELTA6NFD8 242 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 RPL36A-HNRNPH2H7BZ11 118 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 K7EP13 123 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 CORTO00230 105 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 CXorf1O96002 111 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 OR8B8Q15620 311 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 FBXW9Q5XUX1 488 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 KIR2DL5AQ8N109 375 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 OR1L3Q8NH93 324 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 APOBEC3DQ96AK3 386 aaPredicted RBP11.24□□□□□ -0.61
VAMP4-201ENST00000236192 SPSB1Q96BD6 273 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 C6orf106Q9H6K1 298 aaPredicted RBP11.24□□□□□ -0.61
VAMP4-201ENST00000236192 OR4C46A6NHA9 309 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 PCBD1P61457 104 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 TMEM215Q68D42 235 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 AGBL5Q8NDL9 886 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 PPIL1Q9Y3C6 166 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 CYC1P08574 325 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 NSDHLQ15738 373 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 ST6GALNAC6Q969X2 333 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 TMEM222Q9H0R3 208 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 RPRMQ9NS64 109 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 GPR183P32249 361 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 TCTN1Q2MV58 587 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 DMRTC1Q5HYR2 192 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 NOXO1Q8NFA2 376 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 SP7Q8TDD2 431 aaPredicted RBP11.24□□□□□ -0.61
VAMP4-201ENST00000236192 EMC6Q9BV81 110 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 FAM206AQ9NX38 181 aa11.24□□□□□ -0.61
VAMP4-201ENST00000236192 M0R296 226 aa11.23□□□□□ -0.61
VAMP4-201ENST00000236192 FTH1P19P0C7X4 201 aa11.23□□□□□ -0.61
VAMP4-201ENST00000236192 PLGLB1Q02325 96 aa11.23□□□□□ -0.61
VAMP4-201ENST00000236192 CLLU1OSQ5K130 101 aa11.23□□□□□ -0.61
VAMP4-201ENST00000236192 ZNF324BQ6AW86 544 aaPredicted RBP11.23□□□□□ -0.61
VAMP4-201ENST00000236192 C20orf196Q8IYI0 205 aa11.23□□□□□ -0.61
VAMP4-201ENST00000236192 TMEM256Q8N2U0 113 aa11.23□□□□□ -0.61
VAMP4-201ENST00000236192 ABHD14AQ9BUJ0 271 aa11.23□□□□□ -0.61
VAMP4-201ENST00000236192 ULBP2Q9BZM5 246 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms