RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TSPO2Q5TGU0 170 aa7.24□□□□□ -1.25
APOB-201ENST00000233242 SLC36A1Q7Z2H8 476 aa7.24□□□□□ -1.25
APOB-201ENST00000233242 A0A087WWC5 75 aa7.24□□□□□ -1.25
APOB-201ENST00000233242 TMEM222Q9H0R3 208 aa7.24□□□□□ -1.25
APOB-201ENST00000233242 VENTXO95231 258 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 TAF1P21675 1872 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 ACP1P24666 158 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 GRAMD2BQ96HH9 432 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 THOC3Q96J01 351 aaKnown RBP7.23□□□□□ -1.25
APOB-201ENST00000233242 ITGB4P16144 1822 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 FAM90A26D6RGX4 464 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 LMO7DNF2Z398 122 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 SIGLEC5O15389 551 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 TMEM70Q9BUB7 260 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 KIAA1551Q9HCM1 1747 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 CSN3P07498 182 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 TCTN1Q2MV58 587 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 SPNS2Q8IVW8 549 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 OR8A1Q8NGG7 326 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 MYOZ3Q8TDC0 251 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 VSTM2LQ96N03 204 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 MYOZ1Q9NP98 299 aaPredicted RBP7.23□□□□□ -1.25
APOB-201ENST00000233242 MMP17Q9ULZ9 603 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 COX6CP09669 75 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 TCL1AP56279 114 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 TMEM45BQ96B21 275 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 MOGAT1Q96PD6 335 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 PCGF1Q9BSM1 259 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 RBP4P02753 201 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 ZNF774Q6NX45 483 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 VCX2Q9H322 139 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 HSF4Q9ULV5 492 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 ROS1P08922 2347 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 CADP27708 2225 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 FAM157BP0CG42 384 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 NPBWR2P48146 333 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 SPPL3Q8TCT6 385 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 HCSTQ9UBK5 93 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 AESQ08117 197 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 OR5A2Q8NGI9 324 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 A0A1B0GTH9 108 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 AMY1AP04745 511 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 CEBPDP49716 269 aaPredicted RBP7.23□□□□□ -1.25
APOB-201ENST00000233242 MESTQ5EB52 335 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 ZNF362Q5T0B9 420 aaPredicted RBP7.23□□□□□ -1.25
APOB-201ENST00000233242 ECM29Q5VYK3 1845 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 OR4P4Q8NGL7 312 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 MRPL37Q9BZE1 423 aaKnown RBP7.23□□□□□ -1.25
APOB-201ENST00000233242 SDK2Q58EX2 2172 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 RCC1P18754 421 aaPredicted RBP7.23□□□□□ -1.25
APOB-201ENST00000233242 EID2BQ96D98 161 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 SOCS1O15524 211 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 HLA-DRB1P01911 266 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 GLULP15104 373 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 RPS11P62280 158 aaKnown RBP eCLIP7.23□□□□□ -1.25
APOB-201ENST00000233242 SKP2Q13309 424 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 TGIF2LXQ8IUE1 241 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 MISP3Q96FF7 219 aa7.23□□□□□ -1.25
APOB-201ENST00000233242 DLEC1Q9Y238 1755 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 IL2RAP01589 272 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 CD74P04233 296 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 PNLIPP16233 465 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 LINC00696Q6ZRV3 163 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 AQP3Q92482 292 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 SFRP2Q96HF1 295 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 ZNF716A6NP11 495 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 TRMT61AQ96FX7 289 aaKnown RBP7.22□□□□□ -1.25
APOB-201ENST00000233242 OR4C12Q96R67 309 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 AP5S1Q9NUS5 200 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 DLX1P56177 255 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 OR5R1Q8NH85 324 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 PSMG3Q9BT73 122 aaPredicted RBP7.22□□□□□ -1.25
APOB-201ENST00000233242 KLK13Q9UKR3 277 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 hADV38S2A0JD32 116 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 WISP3O95389 354 aaPredicted RBP7.22□□□□□ -1.25
APOB-201ENST00000233242 RPL30P62888 115 aaKnown RBP7.22□□□□□ -1.25
APOB-201ENST00000233242 MS4A18H0YCH9 400 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 M0R296 226 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 SMAGPQ0VAQ4 97 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 MS4A18Q3C1V0 323 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 C1orf100Q5SVJ3 147 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 OR11H4Q8NGC9 324 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 CBLN4Q9NTU7 201 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 GZMHP20718 246 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 TEPPQ6URK8 271 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 COPS9Q8WXC6 57 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 KISS1RQ969F8 398 aaPredicted RBP7.22□□□□□ -1.25
APOB-201ENST00000233242 FLRT3Q9NZU0 649 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 HINT1P49773 126 aaPredicted RBP7.22□□□□□ -1.25
APOB-201ENST00000233242 ZNF519Q8TB69 540 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 SNRNP40Q96DI7 357 aaKnown RBP7.22□□□□□ -1.25
APOB-201ENST00000233242 MYEOVQ96EZ4 313 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 DOCK10Q96BY6 2186 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 RECKO95980 971 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 AGAP20933 346 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 CLDN18P56856 261 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 VASH2Q86V25 355 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 TMEM252Q8N6L7 170 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 AMMECR1Q9Y4X0 333 aaPredicted RBP7.22□□□□□ -1.25
APOB-201ENST00000233242 OTPQ5XKR4 325 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms