RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 FAM90A13PP0C7W8 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A14PP0C7W9 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 FAM90A24PP0C7X0 464 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 OR13C7P0DN81 318 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 S100A2P29034 98 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 HAAOP46952 286 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 SP6Q3SY56 376 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 NPRL2Q8WTW4 380 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 TVP23CQ96ET8 276 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 METTL7AQ9H8H3 244 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 DOK5Q9P104 306 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 DKKL1Q9UK85 242 aa17.64■□□□□ 0.41
SNX3-201ENST00000230085 DHHO43323 396 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 HIST1H1BP16401 226 aaKnown RBP17.63■□□□□ 0.41
SNX3-201ENST00000230085 GLIPR1P48060 266 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 CLDN17P56750 224 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 RAB35Q15286 201 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 Q8NA96 180 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 TMEM178AQ8NBL3 297 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 OR2G3Q8NGZ4 309 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 ELL3Q9HB65 397 aaPredicted RBP17.63■□□□□ 0.41
SNX3-201ENST00000230085 F5H5K5 113 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 SCAF4O95104 1147 aaKnown RBP17.63■□□□□ 0.41
SNX3-201ENST00000230085 RND2P52198 227 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 KLRB1Q12918 225 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 ICAM4Q14773 271 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 NCMAPQ5T1S8 102 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.63■□□□□ 0.41
SNX3-201ENST00000230085 SLC35G3Q8N808 338 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 IL22RA2Q969J5 263 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 TOMM40LQ969M1 308 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 KLF13Q9Y2Y9 288 aaPredicted RBP17.63■□□□□ 0.41
SNX3-201ENST00000230085 PUS1Q9Y606 427 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNX3-201ENST00000230085 KIAA1549Q9HCM3 1950 aa17.63■□□□□ 0.41
SNX3-201ENST00000230085 PINLYPA6NC86 204 aa17.62■□□□□ 0.41
SNX3-201ENST00000230085 MPPED1O15442 326 aa17.62■□□□□ 0.41
SNX3-201ENST00000230085 PDCD6O75340 191 aa17.62■□□□□ 0.41
SNX3-201ENST00000230085 WNT2P09544 360 aa17.62■□□□□ 0.41
SNX3-201ENST00000230085 NKX2-1P43699 371 aaPredicted RBP17.62■□□□□ 0.41
SNX3-201ENST00000230085 RPS10P46783 165 aaKnown RBP17.62■□□□□ 0.41
SNX3-201ENST00000230085 RBP2P50120 134 aa17.62■□□□□ 0.41
SNX3-201ENST00000230085 PNRC1Q12796 327 aaPredicted RBP17.62■□□□□ 0.41
SNX3-201ENST00000230085 RNPS1Q15287 305 aaKnown RBP17.62■□□□□ 0.41
SNX3-201ENST00000230085 TAF9Q16594 264 aa17.62■□□□□ 0.41
SNX3-201ENST00000230085 TMEM176BQ3YBM2 270 aaPredicted RBP17.62■□□□□ 0.41
SNX3-201ENST00000230085 CLEC9AQ6UXN8 241 aa17.62■□□□□ 0.41
SNX3-201ENST00000230085 OR10AD1Q8NGE0 317 aa17.62■□□□□ 0.41
SNX3-201ENST00000230085 RCC1LQ96I51 464 aaKnown RBP17.62■□□□□ 0.41
SNX3-201ENST00000230085 RARRES2Q99969 163 aa17.62■□□□□ 0.41
SNX3-201ENST00000230085 C3orf85A0A1B0GTC6 90 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 IGSF23A1L1A6 192 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 IFNA10P01566 189 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 OSR2Q8N2R0 312 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 TMEM252Q8N6L7 170 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 OR2M7Q8NG81 312 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 AKR7LQ8NHP1 331 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 Q8WTZ3 238 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 RALYQ9UKM9 306 aaKnown RBP17.61■□□□□ 0.41
SNX3-201ENST00000230085 IGKV1-27A0A075B6S5 117 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 ZNF724A8MTY0 619 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 KLRC4-KLRK1H3BQV0 150 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 DNPH1O43598 174 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 PAX1P15863 534 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 TAGLN2P37802 199 aaKnown RBP17.61■□□□□ 0.41
SNX3-201ENST00000230085 MEOX1P50221 254 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 UBE2KP61086 200 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 HERV-K104P61576 105 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 PMP22Q01453 160 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 ID3Q02535 119 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 SLC22A25Q6T423 547 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 CLDND2Q8NHS1 167 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 JSRP1Q96MG2 331 aaPredicted RBP17.61■□□□□ 0.41
SNX3-201ENST00000230085 FAM173AQ9BQD7 235 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 GPR173Q9NS66 373 aa17.61■□□□□ 0.41
SNX3-201ENST00000230085 PHF1O43189 567 aaPredicted RBP17.6■□□□□ 0.41
SNX3-201ENST00000230085 SYNGR3O43761 229 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 NDUFS6O75380 124 aaKnown RBP17.6■□□□□ 0.41
SNX3-201ENST00000230085 PPYP01298 95 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 DBHP09172 617 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 OPRM1P35372 400 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 CCL20P78556 96 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 TLE4Q04727 773 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 FOXO1Q12778 655 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 PMS2P11Q13670 270 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 PHYHD1Q5SRE7 291 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 ZNF429Q86V71 674 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 OR5L1Q8NGL2 311 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 TAAR6Q96RI8 345 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 TP53RKQ96S44 253 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 NIPSNAP3BQ9BS92 247 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 PRDM13Q9H4Q3 707 aa17.6■□□□□ 0.41
SNX3-201ENST00000230085 ZNF587BE7ETH6 402 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 HIST1H2BKO60814 126 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 YIF1AO95070 293 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 HIST1H2BJP06899 126 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 CST2P09228 141 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 SLC25A6P12236 298 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 HIST1H2BOP23527 126 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 UCP1P25874 307 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 HIST1H2BBP33778 126 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms