RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 TSPAN2O60636 221 aa12.61□□□□□ -0.39
PRDM4-201ENST00000228437 GZMBP10144 247 aa12.61□□□□□ -0.39
PRDM4-201ENST00000228437 VDAC1P21796 283 aa12.61□□□□□ -0.39
PRDM4-201ENST00000228437 OR3A1P47881 315 aa12.61□□□□□ -0.39
PRDM4-201ENST00000228437 PTTG1IPP53801 180 aa12.61□□□□□ -0.39
PRDM4-201ENST00000228437 PPP1CBP62140 327 aa12.61□□□□□ -0.39
PRDM4-201ENST00000228437 Q6ZS52 159 aa12.61□□□□□ -0.39
PRDM4-201ENST00000228437 CLDND2Q8NHS1 167 aa12.61□□□□□ -0.39
PRDM4-201ENST00000228437 HOXC4P09017 264 aaPredicted RBP12.6□□□□□ -0.39
PRDM4-201ENST00000228437 THBS3P49746 956 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 NUTF2P61970 127 aaKnown RBP12.6□□□□□ -0.39
PRDM4-201ENST00000228437 JOSD1Q15040 202 aaPredicted RBP12.6□□□□□ -0.39
PRDM4-201ENST00000228437 A0A1B0GX78 115 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 H0Y8G0 127 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 PSG2P11465 335 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 DTYMKP23919 212 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 MDH2P40926 338 aaKnown RBP12.6□□□□□ -0.39
PRDM4-201ENST00000228437 TNFRSF4P43489 277 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 C11orf42Q8N5U0 333 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 CDH23Q9H251 3354 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 KIAA1324LA8MWY0 1029 aaPredicted RBP12.6□□□□□ -0.39
PRDM4-201ENST00000228437 C3orf80F5H4A9 247 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 TNFSF11O14788 317 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 ZNF32P17041 273 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 GABRG2P18507 467 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 SLC35B1P78383 322 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 FNDC7Q5VTL7 733 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 CMTM2Q8TAZ6 248 aa12.6□□□□□ -0.39
PRDM4-201ENST00000228437 MRPL37Q9BZE1 423 aaKnown RBP12.6□□□□□ -0.39
PRDM4-201ENST00000228437 B4DEV8 164 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 CDS2O95674 445 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 FGF5P12034 268 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 ANOS1P23352 680 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 SUCLG1P53597 346 aaKnown RBP12.59□□□□□ -0.39
PRDM4-201ENST00000228437 EDDM3BP56851 147 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 IL24Q13007 206 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 FFAR4Q5NUL3 377 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 C1QL4Q86Z23 238 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 OR6C1Q96RD1 312 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 VPS25Q9BRG1 176 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 DCAF16Q9NXF7 216 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 NAGKQ9UJ70 344 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 SIRPB1O00241 398 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 NPBWR2P48146 333 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 CNN1P51911 297 aaKnown RBP12.59□□□□□ -0.39
PRDM4-201ENST00000228437 SLC38A11Q08AI6 406 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 ZNF506Q5JVG8 444 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 KIAA0895LQ68EN5 471 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 OR10V1Q8NGI7 309 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 RAB24Q969Q5 203 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 ZNF488Q96MN9 340 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 LIME1Q9H400 295 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 ROS1P08922 2347 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 A6NCN8 305 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 MPZP25189 248 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 CD38P28907 300 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 ACOT6Q3I5F7 207 aaPredicted RBP12.59□□□□□ -0.39
PRDM4-201ENST00000228437 PDLIM3Q53GG5 364 aaPredicted RBP12.59□□□□□ -0.39
PRDM4-201ENST00000228437 ERASQ7Z444 233 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 NINJ1Q92982 152 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 GPR27Q9NS67 375 aa12.59□□□□□ -0.39
PRDM4-201ENST00000228437 LYRM2Q9NU23 88 aaPredicted RBP12.59□□□□□ -0.39
PRDM4-201ENST00000228437 HTTP42858 3142 aa12.58□□□□□ -0.39
PRDM4-201ENST00000228437 LOC102723971A0A1B0GUV8 181 aa12.58□□□□□ -0.39
PRDM4-201ENST00000228437 ZNF468Q5VIY5 522 aaPredicted RBP12.58□□□□□ -0.39
PRDM4-201ENST00000228437 HSPB9Q9BQS6 159 aa12.58□□□□□ -0.39
PRDM4-201ENST00000228437 PCNX3Q9H6A9 2034 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 ZNF814B7Z6K7 855 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 PROB1E7EW31 1015 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 E9PLN8 166 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 GYPAP02724 150 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 ZNF818PQ6ZRF7 136 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 SIGLECL1Q8N7X8 197 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 OR10G4Q8NGN3 311 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 OR10G9Q8NGN4 311 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 OR10G7Q8NGN6 311 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 MVB12AQ96EY5 273 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 TMEM222Q9H0R3 208 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 TICRRQ7Z2Z1 1910 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 PLXNA2O75051 1894 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 SYNGR2O43760 224 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 MGST1P10620 155 aaKnown RBP12.58□□□□□ -0.4
PRDM4-201ENST00000228437 RPP30P78346 268 aaKnown RBP12.58□□□□□ -0.4
PRDM4-201ENST00000228437 MRGPRX4Q96LA9 322 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 Q96M66 194 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 OPN3Q9H1Y3 402 aaPredicted RBP12.58□□□□□ -0.4
PRDM4-201ENST00000228437 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 CEACAM1P13688 526 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.4
PRDM4-201ENST00000228437 LRRK1Q38SD2 2015 aa12.57□□□□□ -0.4
PRDM4-201ENST00000228437 S100A7P31151 101 aa12.57□□□□□ -0.4
PRDM4-201ENST00000228437 GNG10P50151 68 aa12.57□□□□□ -0.4
PRDM4-201ENST00000228437 LHFPL2Q6ZUX7 228 aa12.57□□□□□ -0.4
PRDM4-201ENST00000228437 IFI44Q8TCB0 444 aa12.57□□□□□ -0.4
PRDM4-201ENST00000228437 RCC1LQ96I51 464 aaKnown RBP12.57□□□□□ -0.4
PRDM4-201ENST00000228437 IMMP2LQ96T52 175 aa12.57□□□□□ -0.4
PRDM4-201ENST00000228437 SMDT1Q9H4I9 107 aa12.57□□□□□ -0.4
PRDM4-201ENST00000228437 ZNF106Q9H2Y7 1883 aaKnown RBP12.57□□□□□ -0.4
PRDM4-201ENST00000228437 ZDBF2Q9HCK1 2354 aa12.57□□□□□ -0.4
PRDM4-201ENST00000228437 TCL1AP56279 114 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms