RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 DUXBA0A1W2PPF3 345 aa16.18■□□□□ 0.18
YBX3-201ENST00000228251 SIRPB1O00241 398 aa16.18■□□□□ 0.18
YBX3-201ENST00000228251 NXPH2O95156 264 aa16.18■□□□□ 0.18
YBX3-201ENST00000228251 LMO1P25800 156 aa16.18■□□□□ 0.18
YBX3-201ENST00000228251 NMSQ5H8A3 153 aa16.18■□□□□ 0.18
YBX3-201ENST00000228251 MEX3BQ6ZN04 569 aaKnown RBP16.18■□□□□ 0.18
YBX3-201ENST00000228251 RNF141Q8WVD5 230 aa16.18■□□□□ 0.18
YBX3-201ENST00000228251 CXXC4Q9H2H0 198 aa16.18■□□□□ 0.18
YBX3-201ENST00000228251 RCL1Q9Y2P8 373 aaKnown RBP16.18■□□□□ 0.18
YBX3-201ENST00000228251 POMT1Q9Y6A1 747 aa16.18■□□□□ 0.18
YBX3-201ENST00000228251 BOD1L1Q8NFC6 3051 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 NKX2-6A6NCS4 301 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 H0Y980 276 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 PGLYRP1O75594 196 aaPredicted RBP16.17■□□□□ 0.18
YBX3-201ENST00000228251 TMEM33P57088 247 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 HMGN3Q15651 99 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 BEND4Q6ZU67 534 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 C1orf174Q8IYL3 243 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 ERGIC1Q969X5 290 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 KIRREL1Q96J84 757 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 GPHA2Q96T91 129 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 PIGMQ9H3S5 423 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 WASF3Q9UPY6 502 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 SSUH2Q9Y2M2 353 aa16.17■□□□□ 0.18
YBX3-201ENST00000228251 HEATR1Q9H583 2144 aaKnown RBP16.17■□□□□ 0.18
YBX3-201ENST00000228251 RAB19A4D1S5 217 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 SH2D1BO14796 132 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 SCGB1D2O95969 90 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 IGLV2-14P01704 120 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 GRPP07492 148 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 P2RY1P47900 373 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 EIF5AP63241 154 aaKnown RBP16.16■□□□□ 0.18
YBX3-201ENST00000228251 TESK1Q15569 626 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 C1QTNF12Q5T7M4 302 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 OR5D13Q8NGL4 314 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 OR10J5Q8NHC4 309 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 IL22RA2Q969J5 263 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 BSCL2Q96G97 398 aaPredicted RBP16.16■□□□□ 0.18
YBX3-201ENST00000228251 PLA2G2EQ9NZK7 142 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 OR1A1Q9P1Q5 309 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 UBE2J1Q9Y385 318 aaPredicted RBP16.16■□□□□ 0.18
YBX3-201ENST00000228251 MGAQ8IWI9 3026 aa16.16■□□□□ 0.18
YBX3-201ENST00000228251 HSD17B6O14756 317 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 ST8SIA3O43173 380 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 KLK10O43240 276 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 HOXD4P09016 255 aaPredicted RBP16.15■□□□□ 0.18
YBX3-201ENST00000228251 EIF2S3LQ2VIR3 472 aaKnown RBP16.15■□□□□ 0.18
YBX3-201ENST00000228251 GPR157Q5UAW9 335 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 ZNF474Q6S9Z5 364 aaPredicted RBP16.15■□□□□ 0.18
YBX3-201ENST00000228251 RPRMLQ8N4K4 120 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 MARC2Q969Z3 335 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 SMIM8Q96KF7 97 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 OR2S2Q9NQN1 319 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 LPAR3Q9UBY5 353 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.15■□□□□ 0.18
YBX3-201ENST00000228251 GPR137BO60478 399 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 HAND1O96004 215 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 F2RP25116 425 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 ZNF718Q3SXZ3 478 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 C1orf185Q5T7R7 199 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 UQCC3Q6UW78 93 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 WDR82Q6UXN9 313 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 UBAC2Q8NBM4 344 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 PRR7Q8TB68 274 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 ABHD14BQ96IU4 210 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 TAF9BQ9HBM6 251 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 ASF1BQ9NVP2 202 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 TAS2R3Q9NYW6 316 aa16.15■□□□□ 0.18
YBX3-201ENST00000228251 TRAV39A0A0B4J263 110 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 IGHV3-64DA0A0J9YX35 117 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 PSPNO60542 156 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 JTBO76095 146 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 TIMP3P35625 211 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 MSMPQ1L6U9 139 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 ZNF826PQ6ZT77 177 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 CMTM1Q8IZ96 169 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 SPERTQ8NA61 448 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 GALNT11Q8NCW6 608 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 SAT2Q96F10 170 aaPredicted RBP16.14■□□□□ 0.17
YBX3-201ENST00000228251 TAAR3PQ9P1P4 343 aa16.14■□□□□ 0.17
YBX3-201ENST00000228251 ERRFI1Q9UJM3 462 aaPredicted RBP16.14■□□□□ 0.17
YBX3-201ENST00000228251 CUL9Q8IWT3 2517 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 WNT9BO14905 357 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 HEXAP06865 529 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 C3orf36Q3SXR2 165 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 ACP7Q6ZNF0 438 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 ZNF695Q8IW36 515 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 OR10V1Q8NGI7 309 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 WFDC1Q9HC57 220 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 ANKRD11Q6UB99 2663 aaPredicted RBP16.13■□□□□ 0.17
YBX3-201ENST00000228251 ZSCAN5BA6NJL1 495 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 B8ZZF3 427 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 TIMM8AO60220 97 aaPredicted RBP16.13■□□□□ 0.17
YBX3-201ENST00000228251 PTBP3O95758 552 aaKnown RBP16.13■□□□□ 0.17
YBX3-201ENST00000228251 CRYABP02511 175 aaKnown RBP16.13■□□□□ 0.17
YBX3-201ENST00000228251 VDAC1P21796 283 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 CEACAM8P31997 349 aaPredicted RBP16.13■□□□□ 0.17
YBX3-201ENST00000228251 CEBPDP49716 269 aaPredicted RBP16.13■□□□□ 0.17
YBX3-201ENST00000228251 SULT1A2P50226 295 aa16.13■□□□□ 0.17
YBX3-201ENST00000228251 BPIFCQ8NFQ6 507 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms